Protein–RNA interactions for Protein: O35185

Bhlhe40, Class E basic helix-loop-helix protein 40, mousemouse

Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Bhlhe40O35185 Gm12882-201ENSMUST00000121696 517 ntBASIC14.03□□□□□ -0.16
Bhlhe40O35185 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Bhlhe40O35185 Gm21854-201ENSMUST00000179901 471 ntBASIC14.03□□□□□ -0.16
Bhlhe40O35185 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Bhlhe40O35185 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC14.03□□□□□ -0.16
Bhlhe40O35185 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Bhlhe40O35185 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC14.03□□□□□ -0.16
Bhlhe40O35185 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Bhlhe40O35185 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Bhlhe40O35185 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Bhlhe40O35185 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC14.03□□□□□ -0.16
Bhlhe40O35185 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Bhlhe40O35185 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Bhlhe40O35185 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Bhlhe40O35185 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Bhlhe40O35185 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Bhlhe40O35185 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Bhlhe40O35185 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Bhlhe40O35185 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Bhlhe40O35185 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Bhlhe40O35185 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Bhlhe40O35185 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Bhlhe40O35185 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC14.03□□□□□ -0.16
Bhlhe40O35185 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Bhlhe40O35185 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Bhlhe40O35185 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Bhlhe40O35185 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Bhlhe40O35185 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Bhlhe40O35185 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Bhlhe40O35185 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC14.02□□□□□ -0.16
Bhlhe40O35185 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
Bhlhe40O35185 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Bhlhe40O35185 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Bhlhe40O35185 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Bhlhe40O35185 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Bhlhe40O35185 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Bhlhe40O35185 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Bhlhe40O35185 Ldb3-207ENSMUST00000227819 1499 ntBASIC14.02□□□□□ -0.16
Bhlhe40O35185 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Bhlhe40O35185 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Bhlhe40O35185 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Bhlhe40O35185 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC14.02□□□□□ -0.17
Bhlhe40O35185 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC14.02□□□□□ -0.17
Bhlhe40O35185 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Bhlhe40O35185 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC14.02□□□□□ -0.17
Bhlhe40O35185 Ighv1-25-201ENSMUST00000195638 345 ntBASIC14.02□□□□□ -0.17
Bhlhe40O35185 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Bhlhe40O35185 AC154846.1-201ENSMUST00000226278 862 ntBASIC14.02□□□□□ -0.17
Bhlhe40O35185 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Bhlhe40O35185 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Bhlhe40O35185 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Bhlhe40O35185 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Bhlhe40O35185 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Bhlhe40O35185 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Bhlhe40O35185 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Bhlhe40O35185 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Bhlhe40O35185 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Bhlhe40O35185 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC14.01□□□□□ -0.17
Bhlhe40O35185 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC14.01□□□□□ -0.17
Bhlhe40O35185 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Bhlhe40O35185 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC14.01□□□□□ -0.17
Bhlhe40O35185 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Bhlhe40O35185 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Bhlhe40O35185 Gm14928-201ENSMUST00000120198 477 ntBASIC14.01□□□□□ -0.17
Bhlhe40O35185 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Bhlhe40O35185 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC14.01□□□□□ -0.17
Bhlhe40O35185 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC14.01□□□□□ -0.17
Bhlhe40O35185 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Bhlhe40O35185 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC14.01□□□□□ -0.17
Bhlhe40O35185 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Bhlhe40O35185 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC14.01□□□□□ -0.17
Bhlhe40O35185 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Bhlhe40O35185 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Bhlhe40O35185 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Bhlhe40O35185 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Bhlhe40O35185 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Bhlhe40O35185 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC14.01□□□□□ -0.17
Bhlhe40O35185 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Bhlhe40O35185 Gm10605-202ENSMUST00000183019 3198 ntBASIC14.01□□□□□ -0.17
Bhlhe40O35185 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Bhlhe40O35185 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Bhlhe40O35185 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC14□□□□□ -0.17
Bhlhe40O35185 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC14□□□□□ -0.17
Bhlhe40O35185 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC14□□□□□ -0.17
Bhlhe40O35185 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Bhlhe40O35185 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Bhlhe40O35185 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Bhlhe40O35185 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC14□□□□□ -0.17
Bhlhe40O35185 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC14□□□□□ -0.17
Bhlhe40O35185 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Bhlhe40O35185 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Bhlhe40O35185 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Bhlhe40O35185 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Bhlhe40O35185 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC14□□□□□ -0.17
Bhlhe40O35185 Gm4081-201ENSMUST00000195287 1838 ntBASIC14□□□□□ -0.17
Bhlhe40O35185 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC14□□□□□ -0.17
Bhlhe40O35185 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC14□□□□□ -0.17
Bhlhe40O35185 Gm15957-201ENSMUST00000118893 974 ntBASIC14□□□□□ -0.17
Bhlhe40O35185 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC14□□□□□ -0.17
Bhlhe40O35185 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC14□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 44.1 ms