Protein–RNA interactions for Protein: F8VPY8

Colca2, COLCA2 homolog, mousemouse

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Colca2F8VPY8 Rwdd3-201ENSMUST00000039761 1145 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Colca2F8VPY8 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Colca2F8VPY8 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Colca2F8VPY8 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Colca2F8VPY8 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Colca2F8VPY8 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Colca2F8VPY8 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Colca2F8VPY8 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Colca2F8VPY8 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Colca2F8VPY8 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Colca2F8VPY8 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Colca2F8VPY8 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Colca2F8VPY8 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Colca2F8VPY8 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Colca2F8VPY8 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC13.4□□□□□ -0.27
Colca2F8VPY8 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Colca2F8VPY8 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Colca2F8VPY8 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Colca2F8VPY8 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Colca2F8VPY8 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Colca2F8VPY8 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Colca2F8VPY8 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Colca2F8VPY8 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Colca2F8VPY8 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Colca2F8VPY8 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Colca2F8VPY8 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Colca2F8VPY8 Thoc6-204ENSMUST00000115490 1157 ntTSL 5 BASIC13.39□□□□□ -0.27
Colca2F8VPY8 Gm12203-201ENSMUST00000118235 598 ntBASIC13.39□□□□□ -0.27
Colca2F8VPY8 Gm12209-201ENSMUST00000120089 596 ntBASIC13.39□□□□□ -0.27
Colca2F8VPY8 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
Colca2F8VPY8 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC13.39□□□□□ -0.27
Colca2F8VPY8 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC13.39□□□□□ -0.27
Colca2F8VPY8 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC13.39□□□□□ -0.27
Colca2F8VPY8 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Colca2F8VPY8 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC13.39□□□□□ -0.27
Colca2F8VPY8 Gm37008-201ENSMUST00000195712 319 ntBASIC13.39□□□□□ -0.27
Colca2F8VPY8 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Colca2F8VPY8 Taldo1-204ENSMUST00000211654 1362 ntTSL 5 BASIC13.39□□□□□ -0.27
Colca2F8VPY8 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Colca2F8VPY8 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Colca2F8VPY8 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Colca2F8VPY8 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Colca2F8VPY8 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Colca2F8VPY8 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Colca2F8VPY8 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Colca2F8VPY8 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC13.39□□□□□ -0.27
Colca2F8VPY8 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Colca2F8VPY8 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Colca2F8VPY8 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Colca2F8VPY8 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC13.39□□□□□ -0.27
Colca2F8VPY8 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Colca2F8VPY8 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Colca2F8VPY8 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC13.38□□□□□ -0.27
Colca2F8VPY8 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Colca2F8VPY8 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Colca2F8VPY8 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Colca2F8VPY8 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Colca2F8VPY8 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Colca2F8VPY8 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Colca2F8VPY8 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Colca2F8VPY8 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Colca2F8VPY8 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Colca2F8VPY8 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Colca2F8VPY8 Gm13730-201ENSMUST00000121036 1462 ntBASIC13.38□□□□□ -0.27
Colca2F8VPY8 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Colca2F8VPY8 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Colca2F8VPY8 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Colca2F8VPY8 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Colca2F8VPY8 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Colca2F8VPY8 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC13.38□□□□□ -0.27
Colca2F8VPY8 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC13.38□□□□□ -0.27
Colca2F8VPY8 Men1-210ENSMUST00000166909 295 ntTSL 3 BASIC13.38□□□□□ -0.27
Colca2F8VPY8 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Colca2F8VPY8 Gm42627-201ENSMUST00000197347 224 ntBASIC13.38□□□□□ -0.27
Colca2F8VPY8 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Colca2F8VPY8 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Colca2F8VPY8 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Colca2F8VPY8 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Colca2F8VPY8 Txn2-201ENSMUST00000005487 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Colca2F8VPY8 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Colca2F8VPY8 Tas2r137-201ENSMUST00000064932 1073 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Colca2F8VPY8 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Colca2F8VPY8 Gm24526-201ENSMUST00000082921 158 ntBASIC13.38□□□□□ -0.27
Colca2F8VPY8 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Colca2F8VPY8 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Colca2F8VPY8 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Colca2F8VPY8 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Colca2F8VPY8 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Colca2F8VPY8 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Colca2F8VPY8 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Colca2F8VPY8 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Colca2F8VPY8 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC13.38□□□□□ -0.27
Colca2F8VPY8 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Colca2F8VPY8 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Colca2F8VPY8 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Colca2F8VPY8 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Colca2F8VPY8 Erich1-201ENSMUST00000110813 1557 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Colca2F8VPY8 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Colca2F8VPY8 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Colca2F8VPY8 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 56.4 ms