Protein–RNA interactions for Protein: F6WEU2

Ccdc188, Coiled-coil domain-containing 188, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc188F6WEU2 Bet1l-207ENSMUST00000211527 298 ntTSL 5 BASIC14.28□□□□□ -0.12
Ccdc188F6WEU2 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ccdc188F6WEU2 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ccdc188F6WEU2 Sst-201ENSMUST00000004480 599 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ccdc188F6WEU2 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ccdc188F6WEU2 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ccdc188F6WEU2 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ccdc188F6WEU2 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC14.28□□□□□ -0.12
Ccdc188F6WEU2 Gm22042-201ENSMUST00000082989 165 ntBASIC14.28□□□□□ -0.12
Ccdc188F6WEU2 Gm26232-201ENSMUST00000083360 166 ntBASIC14.28□□□□□ -0.12
Ccdc188F6WEU2 Gm24136-201ENSMUST00000083374 165 ntBASIC14.28□□□□□ -0.12
Ccdc188F6WEU2 Rnu1b6-201ENSMUST00000083839 166 ntBASIC14.28□□□□□ -0.12
Ccdc188F6WEU2 Gm26110-201ENSMUST00000083971 165 ntBASIC14.28□□□□□ -0.12
Ccdc188F6WEU2 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ccdc188F6WEU2 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
Ccdc188F6WEU2 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ccdc188F6WEU2 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ccdc188F6WEU2 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ccdc188F6WEU2 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ccdc188F6WEU2 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ccdc188F6WEU2 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
Ccdc188F6WEU2 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ccdc188F6WEU2 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ccdc188F6WEU2 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Ccdc188F6WEU2 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ccdc188F6WEU2 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ccdc188F6WEU2 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ccdc188F6WEU2 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
Ccdc188F6WEU2 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ccdc188F6WEU2 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC14.27□□□□□ -0.13
Ccdc188F6WEU2 Gm11557-201ENSMUST00000120200 1008 ntBASIC14.27□□□□□ -0.13
Ccdc188F6WEU2 Gm12134-201ENSMUST00000122109 520 ntBASIC14.27□□□□□ -0.13
Ccdc188F6WEU2 Gm11831-201ENSMUST00000141538 629 ntTSL 3 BASIC14.27□□□□□ -0.13
Ccdc188F6WEU2 Gm16036-201ENSMUST00000150385 1112 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Ccdc188F6WEU2 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC14.27□□□□□ -0.13
Ccdc188F6WEU2 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC14.27□□□□□ -0.13
Ccdc188F6WEU2 Grp-203ENSMUST00000173985 952 ntAPPRIS P2 TSL 5 BASIC14.27□□□□□ -0.13
Ccdc188F6WEU2 Gm8927-201ENSMUST00000181978 981 ntBASIC14.27□□□□□ -0.13
Ccdc188F6WEU2 Gm37835-201ENSMUST00000193305 361 ntBASIC14.27□□□□□ -0.13
Ccdc188F6WEU2 Gm42797-201ENSMUST00000197573 494 ntTSL 3 BASIC14.27□□□□□ -0.13
Ccdc188F6WEU2 Gm44100-201ENSMUST00000204329 436 ntBASIC14.27□□□□□ -0.13
Ccdc188F6WEU2 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC14.27□□□□□ -0.13
Ccdc188F6WEU2 Cdc34-208ENSMUST00000219791 799 ntTSL 3 BASIC14.27□□□□□ -0.13
Ccdc188F6WEU2 Net1-206ENSMUST00000222504 447 ntTSL 3 BASIC14.27□□□□□ -0.13
Ccdc188F6WEU2 Fam96a-201ENSMUST00000034945 1240 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ccdc188F6WEU2 Lrrc52-201ENSMUST00000036643 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ccdc188F6WEU2 Mrpl18-201ENSMUST00000079121 1219 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ccdc188F6WEU2 Krtap5-1-201ENSMUST00000084413 588 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Ccdc188F6WEU2 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Ccdc188F6WEU2 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ccdc188F6WEU2 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ccdc188F6WEU2 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC14.27□□□□□ -0.13
Ccdc188F6WEU2 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ccdc188F6WEU2 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ccdc188F6WEU2 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ccdc188F6WEU2 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Ccdc188F6WEU2 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Ccdc188F6WEU2 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ccdc188F6WEU2 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC14.26□□□□□ -0.13
Ccdc188F6WEU2 Taf6l-202ENSMUST00000010249 848 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Ccdc188F6WEU2 Olfr647-ps1-201ENSMUST00000121599 960 ntBASIC14.26□□□□□ -0.13
Ccdc188F6WEU2 n-R5s14-201ENSMUST00000122688 107 ntBASIC14.26□□□□□ -0.13
Ccdc188F6WEU2 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Ccdc188F6WEU2 Eloc-207ENSMUST00000187910 620 ntTSL 2 BASIC14.26□□□□□ -0.13
Ccdc188F6WEU2 Gstp-ps-201ENSMUST00000195526 631 ntBASIC14.26□□□□□ -0.13
Ccdc188F6WEU2 Gm42550-201ENSMUST00000201553 960 ntBASIC14.26□□□□□ -0.13
Ccdc188F6WEU2 Gm40437-201ENSMUST00000222338 767 ntTSL 5 BASIC14.26□□□□□ -0.13
Ccdc188F6WEU2 AC140293.1-201ENSMUST00000225626 1247 ntBASIC14.26□□□□□ -0.13
Ccdc188F6WEU2 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ccdc188F6WEU2 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ccdc188F6WEU2 Mill2-201ENSMUST00000072386 1121 ntAPPRIS P4 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ccdc188F6WEU2 Gm5773-201ENSMUST00000090853 1143 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Ccdc188F6WEU2 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ccdc188F6WEU2 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ccdc188F6WEU2 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ccdc188F6WEU2 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC14.26□□□□□ -0.13
Ccdc188F6WEU2 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC14.26□□□□□ -0.13
Ccdc188F6WEU2 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ccdc188F6WEU2 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ccdc188F6WEU2 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ccdc188F6WEU2 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ccdc188F6WEU2 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ccdc188F6WEU2 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ccdc188F6WEU2 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ccdc188F6WEU2 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC14.25□□□□□ -0.13
Ccdc188F6WEU2 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
Ccdc188F6WEU2 Gm42471-201ENSMUST00000201457 1865 ntBASIC14.25□□□□□ -0.13
Ccdc188F6WEU2 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ccdc188F6WEU2 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC14.25□□□□□ -0.13
Ccdc188F6WEU2 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ccdc188F6WEU2 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC14.25□□□□□ -0.13
Ccdc188F6WEU2 Cdk2ap1-204ENSMUST00000111474 1286 ntAPPRIS ALT1 TSL 2 BASIC14.25□□□□□ -0.13
Ccdc188F6WEU2 Gm7857-201ENSMUST00000117957 358 ntBASIC14.25□□□□□ -0.13
Ccdc188F6WEU2 Gm11985-201ENSMUST00000122910 1007 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Ccdc188F6WEU2 Gm16379-201ENSMUST00000161469 348 ntBASIC14.25□□□□□ -0.13
Ccdc188F6WEU2 Arf4os-201ENSMUST00000166902 566 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Ccdc188F6WEU2 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC14.25□□□□□ -0.13
Ccdc188F6WEU2 Gm3508-201ENSMUST00000186012 792 ntBASIC14.25□□□□□ -0.13
Ccdc188F6WEU2 Gm8762-201ENSMUST00000193486 339 ntBASIC14.25□□□□□ -0.13
Ccdc188F6WEU2 Gm5869-201ENSMUST00000200248 1257 ntBASIC14.25□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 19.4 ms