Protein–RNA interactions for Protein: E9Q7P1

Col22a1, Collagen, type XXII, alpha 1, mousemouse

Predictions only

Length 1,613 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col22a1E9Q7P1 1110038B12Rik-203ENSMUST00000173070 434 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Col22a1E9Q7P1 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Col22a1E9Q7P1 Gm6222-202ENSMUST00000182143 629 ntBASIC17.83■□□□□ 0.44
Col22a1E9Q7P1 Myl4-201ENSMUST00000018800 879 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Col22a1E9Q7P1 Gm37388-201ENSMUST00000193984 429 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
Col22a1E9Q7P1 Gm45770-201ENSMUST00000212105 616 ntBASIC17.83■□□□□ 0.44
Col22a1E9Q7P1 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Col22a1E9Q7P1 Net1-206ENSMUST00000222504 447 ntTSL 3 BASIC17.83■□□□□ 0.44
Col22a1E9Q7P1 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Col22a1E9Q7P1 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC17.83■□□□□ 0.44
Col22a1E9Q7P1 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC17.82■□□□□ 0.44
Col22a1E9Q7P1 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Col22a1E9Q7P1 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Col22a1E9Q7P1 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Col22a1E9Q7P1 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Col22a1E9Q7P1 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Col22a1E9Q7P1 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
Col22a1E9Q7P1 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Col22a1E9Q7P1 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Col22a1E9Q7P1 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Col22a1E9Q7P1 Etfrf1-202ENSMUST00000111719 968 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
Col22a1E9Q7P1 Gm8566-201ENSMUST00000120174 465 ntBASIC17.82■□□□□ 0.44
Col22a1E9Q7P1 Odf4-202ENSMUST00000125134 646 ntTSL 3 BASIC17.82■□□□□ 0.44
Col22a1E9Q7P1 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Col22a1E9Q7P1 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Col22a1E9Q7P1 Cryga-201ENSMUST00000061497 625 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Col22a1E9Q7P1 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC17.82■□□□□ 0.44
Col22a1E9Q7P1 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Col22a1E9Q7P1 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Col22a1E9Q7P1 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Col22a1E9Q7P1 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Col22a1E9Q7P1 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Col22a1E9Q7P1 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Col22a1E9Q7P1 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Col22a1E9Q7P1 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Col22a1E9Q7P1 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC17.81■□□□□ 0.44
Col22a1E9Q7P1 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Col22a1E9Q7P1 Gm14130-201ENSMUST00000118417 987 ntBASIC17.81■□□□□ 0.44
Col22a1E9Q7P1 Tnfrsf18-203ENSMUST00000122001 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Col22a1E9Q7P1 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC17.81■□□□□ 0.44
Col22a1E9Q7P1 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Col22a1E9Q7P1 6030443J06Rik-202ENSMUST00000181374 1353 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Col22a1E9Q7P1 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Col22a1E9Q7P1 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Col22a1E9Q7P1 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Col22a1E9Q7P1 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Col22a1E9Q7P1 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Col22a1E9Q7P1 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Col22a1E9Q7P1 Tmem50a-202ENSMUST00000105863 719 ntAPPRIS P1 TSL 3 BASIC17.8■□□□□ 0.44
Col22a1E9Q7P1 Clic3-202ENSMUST00000114265 808 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Col22a1E9Q7P1 Thoc6-203ENSMUST00000115489 1083 ntTSL 5 BASIC17.8■□□□□ 0.44
Col22a1E9Q7P1 Gm16036-201ENSMUST00000150385 1112 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Col22a1E9Q7P1 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Col22a1E9Q7P1 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Col22a1E9Q7P1 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Col22a1E9Q7P1 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Col22a1E9Q7P1 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Col22a1E9Q7P1 Ifna7-201ENSMUST00000105143 573 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Col22a1E9Q7P1 Gstt1-202ENSMUST00000120177 1105 ntTSL 2 BASIC17.8■□□□□ 0.44
Col22a1E9Q7P1 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Col22a1E9Q7P1 Gm2453-202ENSMUST00000195508 568 ntTSL 3 BASIC17.8■□□□□ 0.44
Col22a1E9Q7P1 D9Wsu149-201ENSMUST00000214169 594 ntBASIC17.8■□□□□ 0.44
Col22a1E9Q7P1 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Col22a1E9Q7P1 Cga-201ENSMUST00000029975 687 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Col22a1E9Q7P1 Ctrb1-201ENSMUST00000034435 878 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Col22a1E9Q7P1 Gm10308-201ENSMUST00000095183 742 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
Col22a1E9Q7P1 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Col22a1E9Q7P1 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC17.79■□□□□ 0.44
Col22a1E9Q7P1 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Col22a1E9Q7P1 Gm9252-201ENSMUST00000172364 1602 ntBASIC17.79■□□□□ 0.44
Col22a1E9Q7P1 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Col22a1E9Q7P1 Fbxl12-205ENSMUST00000140702 1555 ntBASIC17.79■□□□□ 0.44
Col22a1E9Q7P1 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Col22a1E9Q7P1 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Col22a1E9Q7P1 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Col22a1E9Q7P1 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Col22a1E9Q7P1 Gm9083-201ENSMUST00000120423 819 ntBASIC17.79■□□□□ 0.44
Col22a1E9Q7P1 Rpsa-ps12-201ENSMUST00000120596 892 ntBASIC17.79■□□□□ 0.44
Col22a1E9Q7P1 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Col22a1E9Q7P1 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC17.79■□□□□ 0.44
Col22a1E9Q7P1 Tmem116-209ENSMUST00000156080 1184 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Col22a1E9Q7P1 Gm3890-201ENSMUST00000182416 207 ntBASIC17.79■□□□□ 0.44
Col22a1E9Q7P1 Gm38317-201ENSMUST00000195564 343 ntBASIC17.79■□□□□ 0.44
Col22a1E9Q7P1 Gm2511-202ENSMUST00000206158 455 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Col22a1E9Q7P1 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Col22a1E9Q7P1 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Col22a1E9Q7P1 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Col22a1E9Q7P1 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Col22a1E9Q7P1 Nccrp1-201ENSMUST00000057974 1531 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Col22a1E9Q7P1 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC17.78■□□□□ 0.44
Col22a1E9Q7P1 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Col22a1E9Q7P1 Gm43598-201ENSMUST00000202482 2479 ntBASIC17.78■□□□□ 0.44
Col22a1E9Q7P1 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Col22a1E9Q7P1 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC17.78■□□□□ 0.44
Col22a1E9Q7P1 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Col22a1E9Q7P1 Gm13665-201ENSMUST00000120830 528 ntBASIC17.78■□□□□ 0.44
Col22a1E9Q7P1 Gm14277-201ENSMUST00000121195 360 ntBASIC17.78■□□□□ 0.44
Col22a1E9Q7P1 Got2-ps1-201ENSMUST00000121655 1293 ntBASIC17.78■□□□□ 0.44
Col22a1E9Q7P1 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC17.78■□□□□ 0.44
Col22a1E9Q7P1 Gm18393-201ENSMUST00000208349 1131 ntBASIC17.78■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 45.4 ms