Protein–RNA interactions for Protein: E9PXC0

Srp54b, Signal recognition particle 54 kDa protein, mousemouse

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srp54bE9PXC0 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC14.06□□□□□ -0.16
Srp54bE9PXC0 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Srp54bE9PXC0 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Srp54bE9PXC0 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Srp54bE9PXC0 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Srp54bE9PXC0 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Srp54bE9PXC0 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Srp54bE9PXC0 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Srp54bE9PXC0 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC14.06□□□□□ -0.16
Srp54bE9PXC0 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Srp54bE9PXC0 Gm12490-201ENSMUST00000120255 560 ntBASIC14.06□□□□□ -0.16
Srp54bE9PXC0 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
Srp54bE9PXC0 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC14.06□□□□□ -0.16
Srp54bE9PXC0 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Srp54bE9PXC0 AC154239.3-201ENSMUST00000226933 674 ntBASIC14.06□□□□□ -0.16
Srp54bE9PXC0 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Srp54bE9PXC0 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Srp54bE9PXC0 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC14.06□□□□□ -0.16
Srp54bE9PXC0 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Srp54bE9PXC0 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Srp54bE9PXC0 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Srp54bE9PXC0 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Srp54bE9PXC0 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Srp54bE9PXC0 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Srp54bE9PXC0 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC14.06□□□□□ -0.16
Srp54bE9PXC0 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Srp54bE9PXC0 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Srp54bE9PXC0 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Srp54bE9PXC0 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Srp54bE9PXC0 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Srp54bE9PXC0 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Srp54bE9PXC0 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Srp54bE9PXC0 AC174678.1-201ENSMUST00000228007 2749 ntBASIC14.06□□□□□ -0.16
Srp54bE9PXC0 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Srp54bE9PXC0 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Srp54bE9PXC0 Gm5357-201ENSMUST00000212720 1924 ntBASIC14.05□□□□□ -0.16
Srp54bE9PXC0 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Srp54bE9PXC0 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Srp54bE9PXC0 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Srp54bE9PXC0 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Srp54bE9PXC0 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Srp54bE9PXC0 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Srp54bE9PXC0 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Srp54bE9PXC0 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Srp54bE9PXC0 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC14.05□□□□□ -0.16
Srp54bE9PXC0 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Srp54bE9PXC0 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Srp54bE9PXC0 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC14.05□□□□□ -0.16
Srp54bE9PXC0 Gm12882-201ENSMUST00000121696 517 ntBASIC14.05□□□□□ -0.16
Srp54bE9PXC0 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Srp54bE9PXC0 Gm28760-201ENSMUST00000185995 736 ntBASIC14.05□□□□□ -0.16
Srp54bE9PXC0 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC14.05□□□□□ -0.16
Srp54bE9PXC0 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC14.05□□□□□ -0.16
Srp54bE9PXC0 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC14.05□□□□□ -0.16
Srp54bE9PXC0 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Srp54bE9PXC0 AC154846.1-201ENSMUST00000226278 862 ntBASIC14.05□□□□□ -0.16
Srp54bE9PXC0 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC14.05□□□□□ -0.16
Srp54bE9PXC0 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Srp54bE9PXC0 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Srp54bE9PXC0 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Srp54bE9PXC0 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC14.05□□□□□ -0.16
Srp54bE9PXC0 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Srp54bE9PXC0 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Srp54bE9PXC0 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Srp54bE9PXC0 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Srp54bE9PXC0 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Srp54bE9PXC0 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Srp54bE9PXC0 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Srp54bE9PXC0 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Srp54bE9PXC0 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Srp54bE9PXC0 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Srp54bE9PXC0 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Srp54bE9PXC0 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Srp54bE9PXC0 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Srp54bE9PXC0 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Srp54bE9PXC0 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Srp54bE9PXC0 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Srp54bE9PXC0 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Srp54bE9PXC0 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC14.04□□□□□ -0.16
Srp54bE9PXC0 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Srp54bE9PXC0 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Srp54bE9PXC0 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Srp54bE9PXC0 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Srp54bE9PXC0 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC14.04□□□□□ -0.16
Srp54bE9PXC0 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
Srp54bE9PXC0 Gm23984-201ENSMUST00000157139 203 ntBASIC14.04□□□□□ -0.16
Srp54bE9PXC0 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC14.04□□□□□ -0.16
Srp54bE9PXC0 Gm10766-202ENSMUST00000194123 606 ntBASIC14.04□□□□□ -0.16
Srp54bE9PXC0 Gm8515-201ENSMUST00000194852 576 ntBASIC14.04□□□□□ -0.16
Srp54bE9PXC0 Gm6745-201ENSMUST00000199216 526 ntBASIC14.04□□□□□ -0.16
Srp54bE9PXC0 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Srp54bE9PXC0 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Srp54bE9PXC0 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Srp54bE9PXC0 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC14.04□□□□□ -0.16
Srp54bE9PXC0 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC14.04□□□□□ -0.16
Srp54bE9PXC0 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Srp54bE9PXC0 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Srp54bE9PXC0 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Srp54bE9PXC0 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Srp54bE9PXC0 Gm10584-201ENSMUST00000207036 2628 ntBASIC14.04□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 32 ms