Protein–RNA interactions for Protein: D3Z4R1

Hfm1, Probable ATP-dependent DNA helicase HFM1, mousemouse

Predictions only

Length 1,434 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hfm1D3Z4R1 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Hfm1D3Z4R1 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Hfm1D3Z4R1 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Hfm1D3Z4R1 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Hfm1D3Z4R1 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Hfm1D3Z4R1 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Hfm1D3Z4R1 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Hfm1D3Z4R1 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Hfm1D3Z4R1 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Hfm1D3Z4R1 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Hfm1D3Z4R1 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Hfm1D3Z4R1 Lsm2-207ENSMUST00000173004 870 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Hfm1D3Z4R1 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC19.71■□□□□ 0.75
Hfm1D3Z4R1 Gm3809-201ENSMUST00000180973 1006 ntBASIC19.71■□□□□ 0.75
Hfm1D3Z4R1 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC19.71■□□□□ 0.75
Hfm1D3Z4R1 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Hfm1D3Z4R1 Tyms-ps-201ENSMUST00000219550 915 ntBASIC19.71■□□□□ 0.75
Hfm1D3Z4R1 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Hfm1D3Z4R1 1700007G11Rik-201ENSMUST00000080333 861 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Hfm1D3Z4R1 Olfr521-201ENSMUST00000098263 967 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
Hfm1D3Z4R1 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Hfm1D3Z4R1 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
Hfm1D3Z4R1 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
Hfm1D3Z4R1 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Hfm1D3Z4R1 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
Hfm1D3Z4R1 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Hfm1D3Z4R1 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC19.71■□□□□ 0.75
Hfm1D3Z4R1 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Hfm1D3Z4R1 Gm45630-201ENSMUST00000210243 1911 ntBASIC19.7■□□□□ 0.74
Hfm1D3Z4R1 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Hfm1D3Z4R1 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC19.7■□□□□ 0.74
Hfm1D3Z4R1 Mir686-201ENSMUST00000102174 109 ntBASIC19.7■□□□□ 0.74
Hfm1D3Z4R1 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Hfm1D3Z4R1 Hnf4aos-203ENSMUST00000141329 839 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Hfm1D3Z4R1 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Hfm1D3Z4R1 Cryge-202ENSMUST00000161960 690 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Hfm1D3Z4R1 Gm44364-201ENSMUST00000198368 141 ntBASIC19.7■□□□□ 0.74
Hfm1D3Z4R1 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
Hfm1D3Z4R1 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Hfm1D3Z4R1 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Hfm1D3Z4R1 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC19.7■□□□□ 0.74
Hfm1D3Z4R1 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Hfm1D3Z4R1 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Hfm1D3Z4R1 Gm9347-201ENSMUST00000211473 1607 ntBASIC19.7■□□□□ 0.74
Hfm1D3Z4R1 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Hfm1D3Z4R1 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Hfm1D3Z4R1 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC19.7■□□□□ 0.74
Hfm1D3Z4R1 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
Hfm1D3Z4R1 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC19.7■□□□□ 0.74
Hfm1D3Z4R1 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Hfm1D3Z4R1 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC19.7■□□□□ 0.74
Hfm1D3Z4R1 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Hfm1D3Z4R1 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Hfm1D3Z4R1 C030047K22Rik-201ENSMUST00000150382 1164 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Hfm1D3Z4R1 Gm37497-201ENSMUST00000195830 798 ntBASIC19.69■□□□□ 0.74
Hfm1D3Z4R1 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Hfm1D3Z4R1 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Hfm1D3Z4R1 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Hfm1D3Z4R1 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
Hfm1D3Z4R1 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Hfm1D3Z4R1 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Hfm1D3Z4R1 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Hfm1D3Z4R1 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC19.69■□□□□ 0.74
Hfm1D3Z4R1 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
Hfm1D3Z4R1 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
Hfm1D3Z4R1 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
Hfm1D3Z4R1 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Hfm1D3Z4R1 Itk-202ENSMUST00000101306 1185 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Hfm1D3Z4R1 Gm22323-201ENSMUST00000103832 109 ntBASIC19.68■□□□□ 0.74
Hfm1D3Z4R1 Gm11400-201ENSMUST00000120853 1214 ntBASIC19.68■□□□□ 0.74
Hfm1D3Z4R1 Gm16087-201ENSMUST00000124395 964 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Hfm1D3Z4R1 Gm16570-201ENSMUST00000161951 436 ntBASIC19.68■□□□□ 0.74
Hfm1D3Z4R1 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Hfm1D3Z4R1 Gm29396-201ENSMUST00000185659 716 ntBASIC19.68■□□□□ 0.74
Hfm1D3Z4R1 Mettl5-201ENSMUST00000060447 968 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
Hfm1D3Z4R1 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Hfm1D3Z4R1 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Hfm1D3Z4R1 Gm6203-201ENSMUST00000209575 1342 ntBASIC19.68■□□□□ 0.74
Hfm1D3Z4R1 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC19.68■□□□□ 0.74
Hfm1D3Z4R1 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Hfm1D3Z4R1 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Hfm1D3Z4R1 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Hfm1D3Z4R1 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Hfm1D3Z4R1 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
Hfm1D3Z4R1 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
Hfm1D3Z4R1 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
Hfm1D3Z4R1 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC19.68■□□□□ 0.74
Hfm1D3Z4R1 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Hfm1D3Z4R1 Gm25927-201ENSMUST00000175058 117 ntBASIC19.68■□□□□ 0.74
Hfm1D3Z4R1 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC19.68■□□□□ 0.74
Hfm1D3Z4R1 Gm18935-201ENSMUST00000212692 664 ntBASIC19.68■□□□□ 0.74
Hfm1D3Z4R1 AC131690.1-201ENSMUST00000218406 374 ntBASIC19.68■□□□□ 0.74
Hfm1D3Z4R1 Gm17870-201ENSMUST00000219489 1174 ntBASIC19.68■□□□□ 0.74
Hfm1D3Z4R1 Gm2824-203ENSMUST00000226189 1228 ntBASIC19.68■□□□□ 0.74
Hfm1D3Z4R1 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Hfm1D3Z4R1 Gm10268-201ENSMUST00000085340 555 ntBASIC19.68■□□□□ 0.74
Hfm1D3Z4R1 Gm9954-202ENSMUST00000198686 4725 ntBASIC19.67■□□□□ 0.74
Hfm1D3Z4R1 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Hfm1D3Z4R1 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Hfm1D3Z4R1 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 36.5 ms