Protein–RNA interactions for Protein: D3YZU1

Shank1, SH3 and multiple ankyrin repeat domains protein 1, mousemouse

Predictions only

Length 2,167 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank1D3YZU1 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Shank1D3YZU1 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Shank1D3YZU1 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Shank1D3YZU1 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Shank1D3YZU1 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Shank1D3YZU1 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Shank1D3YZU1 Mal-201ENSMUST00000028853 486 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Shank1D3YZU1 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Shank1D3YZU1 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Shank1D3YZU1 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Shank1D3YZU1 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Shank1D3YZU1 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC12.78□□□□□ -0.36
Shank1D3YZU1 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Shank1D3YZU1 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC12.78□□□□□ -0.36
Shank1D3YZU1 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Shank1D3YZU1 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Shank1D3YZU1 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Shank1D3YZU1 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Shank1D3YZU1 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Shank1D3YZU1 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Shank1D3YZU1 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Shank1D3YZU1 Gm6944-201ENSMUST00000182449 1006 ntBASIC12.77□□□□□ -0.36
Shank1D3YZU1 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC12.77□□□□□ -0.36
Shank1D3YZU1 AC153872.1-201ENSMUST00000199539 128 ntBASIC12.77□□□□□ -0.36
Shank1D3YZU1 AC144543.1-201ENSMUST00000221840 1064 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Shank1D3YZU1 AC123645.1-201ENSMUST00000228469 605 ntBASIC12.77□□□□□ -0.36
Shank1D3YZU1 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Shank1D3YZU1 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.36
Shank1D3YZU1 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Shank1D3YZU1 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Shank1D3YZU1 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Shank1D3YZU1 Ccdc166-201ENSMUST00000182172 2584 ntBASIC12.77□□□□□ -0.36
Shank1D3YZU1 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC12.77□□□□□ -0.37
Shank1D3YZU1 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Shank1D3YZU1 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Shank1D3YZU1 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Shank1D3YZU1 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Shank1D3YZU1 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Shank1D3YZU1 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC12.77□□□□□ -0.37
Shank1D3YZU1 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Shank1D3YZU1 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Shank1D3YZU1 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC12.77□□□□□ -0.37
Shank1D3YZU1 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Shank1D3YZU1 Gm15393-201ENSMUST00000120499 219 ntBASIC12.77□□□□□ -0.37
Shank1D3YZU1 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Shank1D3YZU1 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Shank1D3YZU1 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC12.77□□□□□ -0.37
Shank1D3YZU1 Gm18307-201ENSMUST00000206864 949 ntBASIC12.77□□□□□ -0.37
Shank1D3YZU1 Gm45892-201ENSMUST00000212627 273 ntTSL 5 BASIC12.77□□□□□ -0.37
Shank1D3YZU1 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC12.77□□□□□ -0.37
Shank1D3YZU1 AC122459.1-201ENSMUST00000228373 885 ntBASIC12.77□□□□□ -0.37
Shank1D3YZU1 Rrp36-201ENSMUST00000024766 1195 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Shank1D3YZU1 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Shank1D3YZU1 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Shank1D3YZU1 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Shank1D3YZU1 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Shank1D3YZU1 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Shank1D3YZU1 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Shank1D3YZU1 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Shank1D3YZU1 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Shank1D3YZU1 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Shank1D3YZU1 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Shank1D3YZU1 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Shank1D3YZU1 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Shank1D3YZU1 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Shank1D3YZU1 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Shank1D3YZU1 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Shank1D3YZU1 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Shank1D3YZU1 Gm43195-201ENSMUST00000200614 2332 ntBASIC12.76□□□□□ -0.37
Shank1D3YZU1 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC12.76□□□□□ -0.37
Shank1D3YZU1 Nipsnap3b-202ENSMUST00000107665 848 ntTSL 2 BASIC12.76□□□□□ -0.37
Shank1D3YZU1 Gm20033-203ENSMUST00000180912 796 ntTSL 5 BASIC12.76□□□□□ -0.37
Shank1D3YZU1 Gm45841-201ENSMUST00000207700 164 ntBASIC12.76□□□□□ -0.37
Shank1D3YZU1 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Shank1D3YZU1 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Shank1D3YZU1 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Shank1D3YZU1 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Shank1D3YZU1 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Shank1D3YZU1 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Shank1D3YZU1 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Shank1D3YZU1 Oprm1-202ENSMUST00000052751 1334 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Shank1D3YZU1 Oprm1-207ENSMUST00000092731 1332 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Shank1D3YZU1 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Shank1D3YZU1 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Shank1D3YZU1 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Shank1D3YZU1 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Shank1D3YZU1 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Shank1D3YZU1 Rps3-202ENSMUST00000107096 952 ntTSL 3 BASIC12.76□□□□□ -0.37
Shank1D3YZU1 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC12.76□□□□□ -0.37
Shank1D3YZU1 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Shank1D3YZU1 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Shank1D3YZU1 Gm10313-201ENSMUST00000095320 1002 ntBASIC12.76□□□□□ -0.37
Shank1D3YZU1 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Shank1D3YZU1 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Shank1D3YZU1 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Shank1D3YZU1 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Shank1D3YZU1 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Shank1D3YZU1 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Shank1D3YZU1 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Shank1D3YZU1 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms