Protein–RNA interactions for Protein: D3YXG0

Hmcn1, Hemicentin-1, mousemouse

Predictions only

Length 5,634 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmcn1D3YXG0 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
Hmcn1D3YXG0 Aire-202ENSMUST00000105395 1630 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
Hmcn1D3YXG0 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
Hmcn1D3YXG0 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
Hmcn1D3YXG0 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC4.03□□□□□ -1.76
Hmcn1D3YXG0 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
Hmcn1D3YXG0 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
Hmcn1D3YXG0 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
Hmcn1D3YXG0 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC4.03□□□□□ -1.76
Hmcn1D3YXG0 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC4.03□□□□□ -1.76
Hmcn1D3YXG0 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC4.03□□□□□ -1.76
Hmcn1D3YXG0 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
Hmcn1D3YXG0 Gm11618-201ENSMUST00000117946 267 ntBASIC4.03□□□□□ -1.76
Hmcn1D3YXG0 Gm29676-202ENSMUST00000222409 364 ntTSL 2 BASIC4.03□□□□□ -1.76
Hmcn1D3YXG0 AC161537.1-201ENSMUST00000226199 1015 ntBASIC4.03□□□□□ -1.76
Hmcn1D3YXG0 AC159103.1-201ENSMUST00000228325 429 ntBASIC4.03□□□□□ -1.76
Hmcn1D3YXG0 Ntng1-201ENSMUST00000051253 327 ntBASIC4.03□□□□□ -1.76
Hmcn1D3YXG0 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
Hmcn1D3YXG0 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
Hmcn1D3YXG0 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC4.03□□□□□ -1.76
Hmcn1D3YXG0 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
Hmcn1D3YXG0 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
Hmcn1D3YXG0 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
Hmcn1D3YXG0 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
Hmcn1D3YXG0 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC4.03□□□□□ -1.76
Hmcn1D3YXG0 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
Hmcn1D3YXG0 AC125108.1-201ENSMUST00000218986 2330 ntBASIC4.03□□□□□ -1.76
Hmcn1D3YXG0 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC4.03□□□□□ -1.76
Hmcn1D3YXG0 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
Hmcn1D3YXG0 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC4.03□□□□□ -1.76
Hmcn1D3YXG0 Pitpnb-201ENSMUST00000086635 2761 ntAPPRIS P3 TSL 1 (best) BASIC4.03□□□□□ -1.76
Hmcn1D3YXG0 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
Hmcn1D3YXG0 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC4.03□□□□□ -1.76
Hmcn1D3YXG0 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
Hmcn1D3YXG0 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
Hmcn1D3YXG0 Pmp22-202ENSMUST00000108700 733 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
Hmcn1D3YXG0 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC4.03□□□□□ -1.76
Hmcn1D3YXG0 Mitd1-205ENSMUST00000139725 1175 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
Hmcn1D3YXG0 Gm16347-202ENSMUST00000149000 772 ntTSL 3 BASIC4.03□□□□□ -1.76
Hmcn1D3YXG0 Rps28-203ENSMUST00000173019 437 ntAPPRIS P1 TSL 3 BASIC4.03□□□□□ -1.76
Hmcn1D3YXG0 Olfr286-202ENSMUST00000205305 969 ntBASIC4.03□□□□□ -1.76
Hmcn1D3YXG0 Gm10076-201ENSMUST00000073238 384 ntBASIC4.03□□□□□ -1.76
Hmcn1D3YXG0 Nat8f6-201ENSMUST00000087656 925 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
Hmcn1D3YXG0 Mir483-201ENSMUST00000093631 73 ntBASIC4.03□□□□□ -1.76
Hmcn1D3YXG0 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC4.03□□□□□ -1.76
Hmcn1D3YXG0 4930465M20Rik-201ENSMUST00000130564 1446 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
Hmcn1D3YXG0 Zfp809-201ENSMUST00000072465 1425 ntAPPRIS P2 TSL 1 (best) BASIC4.03□□□□□ -1.76
Hmcn1D3YXG0 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
Hmcn1D3YXG0 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
Hmcn1D3YXG0 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
Hmcn1D3YXG0 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
Hmcn1D3YXG0 AC124561.2-201ENSMUST00000226657 1973 ntBASIC4.03□□□□□ -1.76
Hmcn1D3YXG0 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
Hmcn1D3YXG0 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
Hmcn1D3YXG0 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC4.03□□□□□ -1.76
Hmcn1D3YXG0 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
Hmcn1D3YXG0 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
Hmcn1D3YXG0 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
Hmcn1D3YXG0 Crcp-201ENSMUST00000026608 1492 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
Hmcn1D3YXG0 Gm45768-201ENSMUST00000206763 3202 ntBASIC4.03□□□□□ -1.76
Hmcn1D3YXG0 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
Hmcn1D3YXG0 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
Hmcn1D3YXG0 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
Hmcn1D3YXG0 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC4.03□□□□□ -1.76
Hmcn1D3YXG0 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
Hmcn1D3YXG0 Mir181d-201ENSMUST00000102383 72 ntBASIC4.03□□□□□ -1.77
Hmcn1D3YXG0 Nppa-201ENSMUST00000103230 865 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.77
Hmcn1D3YXG0 Park7-202ENSMUST00000105673 919 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.77
Hmcn1D3YXG0 Prr29-202ENSMUST00000106816 771 ntAPPRIS P2 TSL 1 (best) BASIC4.03□□□□□ -1.77
Hmcn1D3YXG0 Mageb17-ps-201ENSMUST00000117902 919 ntBASIC4.03□□□□□ -1.77
Hmcn1D3YXG0 Zar1l-201ENSMUST00000118769 895 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.77
Hmcn1D3YXG0 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC4.03□□□□□ -1.77
Hmcn1D3YXG0 Gm17116-201ENSMUST00000169175 1013 ntTSL 1 (best) BASIC4.03□□□□□ -1.77
Hmcn1D3YXG0 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC4.03□□□□□ -1.77
Hmcn1D3YXG0 Gm29797-201ENSMUST00000207856 755 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.77
Hmcn1D3YXG0 Prrxl1-205ENSMUST00000228878 723 ntBASIC4.03□□□□□ -1.77
Hmcn1D3YXG0 Cym-201ENSMUST00000029504 1236 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.77
Hmcn1D3YXG0 Cdkn3-201ENSMUST00000067426 917 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.77
Hmcn1D3YXG0 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.77
Hmcn1D3YXG0 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.77
Hmcn1D3YXG0 E330021D16Rik-203ENSMUST00000204830 1813 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.77
Hmcn1D3YXG0 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC4.03□□□□□ -1.77
Hmcn1D3YXG0 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC4.02□□□□□ -1.77
Hmcn1D3YXG0 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC4.02□□□□□ -1.77
Hmcn1D3YXG0 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC4.02□□□□□ -1.77
Hmcn1D3YXG0 Gm42941-201ENSMUST00000200347 1321 ntBASIC4.02□□□□□ -1.77
Hmcn1D3YXG0 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
Hmcn1D3YXG0 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC4.02□□□□□ -1.77
Hmcn1D3YXG0 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
Hmcn1D3YXG0 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC4.02□□□□□ -1.77
Hmcn1D3YXG0 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
Hmcn1D3YXG0 Dclk1-215ENSMUST00000200352 1662 ntTSL 2 BASIC4.02□□□□□ -1.77
Hmcn1D3YXG0 Daw1-201ENSMUST00000065403 1651 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
Hmcn1D3YXG0 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
Hmcn1D3YXG0 Gm10710-201ENSMUST00000047876 3971 ntBASIC4.02□□□□□ -1.77
Hmcn1D3YXG0 Limd2-203ENSMUST00000106875 936 ntAPPRIS P1 TSL 3 BASIC4.02□□□□□ -1.77
Hmcn1D3YXG0 Fam129a-203ENSMUST00000111875 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC4.02□□□□□ -1.77
Hmcn1D3YXG0 C330007P06Rik-203ENSMUST00000115249 1145 ntTSL 5 BASIC4.02□□□□□ -1.77
Hmcn1D3YXG0 Smim5-203ENSMUST00000152171 1113 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
Hmcn1D3YXG0 Gm24749-201ENSMUST00000157838 343 ntBASIC4.02□□□□□ -1.77
Retrieved 100 of 76,532 protein–RNA pairs in 46.4 ms