Protein–RNA interactions for Protein: B2RRE7

Otud4, OTU domain-containing protein 4, mousemouse

Known RBP Predictions only

Length 1,107 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Otud4B2RRE7 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC13.54□□□□□ -0.24
Otud4B2RRE7 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Otud4B2RRE7 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC13.54□□□□□ -0.24
Otud4B2RRE7 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC13.54□□□□□ -0.24
Otud4B2RRE7 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC13.54□□□□□ -0.24
Otud4B2RRE7 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Otud4B2RRE7 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC13.54□□□□□ -0.24
Otud4B2RRE7 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
Otud4B2RRE7 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Otud4B2RRE7 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Otud4B2RRE7 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC13.54□□□□□ -0.24
Otud4B2RRE7 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Otud4B2RRE7 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC13.54□□□□□ -0.24
Otud4B2RRE7 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Otud4B2RRE7 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Otud4B2RRE7 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Otud4B2RRE7 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Otud4B2RRE7 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Otud4B2RRE7 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Otud4B2RRE7 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC13.54□□□□□ -0.24
Otud4B2RRE7 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Otud4B2RRE7 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Otud4B2RRE7 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Otud4B2RRE7 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
Otud4B2RRE7 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Otud4B2RRE7 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Otud4B2RRE7 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Otud4B2RRE7 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Otud4B2RRE7 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Otud4B2RRE7 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Otud4B2RRE7 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Otud4B2RRE7 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Otud4B2RRE7 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC13.53□□□□□ -0.24
Otud4B2RRE7 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC13.53□□□□□ -0.24
Otud4B2RRE7 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC13.53□□□□□ -0.24
Otud4B2RRE7 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Otud4B2RRE7 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Otud4B2RRE7 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Otud4B2RRE7 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Otud4B2RRE7 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC13.53□□□□□ -0.24
Otud4B2RRE7 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Otud4B2RRE7 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC13.53□□□□□ -0.24
Otud4B2RRE7 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC13.53□□□□□ -0.24
Otud4B2RRE7 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC13.53□□□□□ -0.24
Otud4B2RRE7 Gm24158-201ENSMUST00000175263 71 ntBASIC13.53□□□□□ -0.24
Otud4B2RRE7 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Otud4B2RRE7 Gm8597-201ENSMUST00000191525 1109 ntBASIC13.53□□□□□ -0.24
Otud4B2RRE7 Gm10253-201ENSMUST00000194270 940 ntBASIC13.53□□□□□ -0.24
Otud4B2RRE7 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC13.53□□□□□ -0.24
Otud4B2RRE7 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC13.53□□□□□ -0.24
Otud4B2RRE7 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC13.53□□□□□ -0.24
Otud4B2RRE7 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC13.53□□□□□ -0.24
Otud4B2RRE7 Gm10154-201ENSMUST00000084445 354 ntBASIC13.53□□□□□ -0.24
Otud4B2RRE7 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Otud4B2RRE7 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Otud4B2RRE7 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC13.53□□□□□ -0.24
Otud4B2RRE7 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Otud4B2RRE7 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Otud4B2RRE7 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Otud4B2RRE7 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Otud4B2RRE7 CT025626.1-201ENSMUST00000223735 1455 ntBASIC13.53□□□□□ -0.24
Otud4B2RRE7 Gm14451-201ENSMUST00000121581 1542 ntBASIC13.53□□□□□ -0.24
Otud4B2RRE7 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC13.53□□□□□ -0.24
Otud4B2RRE7 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Otud4B2RRE7 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC13.53□□□□□ -0.24
Otud4B2RRE7 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Otud4B2RRE7 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Otud4B2RRE7 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC13.52□□□□□ -0.24
Otud4B2RRE7 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.24
Otud4B2RRE7 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC13.52□□□□□ -0.24
Otud4B2RRE7 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Otud4B2RRE7 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Otud4B2RRE7 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Otud4B2RRE7 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Otud4B2RRE7 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Otud4B2RRE7 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC13.52□□□□□ -0.24
Otud4B2RRE7 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Otud4B2RRE7 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Otud4B2RRE7 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Otud4B2RRE7 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
Otud4B2RRE7 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Otud4B2RRE7 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Otud4B2RRE7 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Otud4B2RRE7 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Otud4B2RRE7 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC13.52□□□□□ -0.25
Otud4B2RRE7 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
Otud4B2RRE7 Gm27622-201ENSMUST00000183779 60 ntBASIC13.52□□□□□ -0.25
Otud4B2RRE7 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC13.52□□□□□ -0.25
Otud4B2RRE7 Arhgef33-209ENSMUST00000225223 714 ntBASIC13.52□□□□□ -0.25
Otud4B2RRE7 AC155729.1-201ENSMUST00000227758 544 ntBASIC13.52□□□□□ -0.25
Otud4B2RRE7 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Otud4B2RRE7 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Otud4B2RRE7 Gm6018-201ENSMUST00000216090 1306 ntBASIC13.52□□□□□ -0.25
Otud4B2RRE7 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
Otud4B2RRE7 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
Otud4B2RRE7 Nudt18-203ENSMUST00000228768 1578 ntBASIC13.52□□□□□ -0.25
Otud4B2RRE7 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Otud4B2RRE7 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Otud4B2RRE7 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Otud4B2RRE7 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC13.52□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 45.6 ms