Protein–RNA interactions for Protein: B1AYL1

Scn7a, Sodium channel protein, mousemouse

Predictions only

Length 1,681 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn7aB1AYL1 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Scn7aB1AYL1 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC18.05■□□□□ 0.48
Scn7aB1AYL1 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Scn7aB1AYL1 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Scn7aB1AYL1 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC18.05■□□□□ 0.48
Scn7aB1AYL1 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Scn7aB1AYL1 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Scn7aB1AYL1 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC18.05■□□□□ 0.48
Scn7aB1AYL1 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Scn7aB1AYL1 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Scn7aB1AYL1 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Scn7aB1AYL1 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Scn7aB1AYL1 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Scn7aB1AYL1 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Scn7aB1AYL1 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC18.05■□□□□ 0.48
Scn7aB1AYL1 Gm26618-201ENSMUST00000181123 497 ntTSL 2 BASIC18.05■□□□□ 0.48
Scn7aB1AYL1 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
Scn7aB1AYL1 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
Scn7aB1AYL1 Gm9257-201ENSMUST00000221254 232 ntBASIC18.05■□□□□ 0.48
Scn7aB1AYL1 Scgb3a2-201ENSMUST00000043803 842 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Scn7aB1AYL1 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
Scn7aB1AYL1 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Scn7aB1AYL1 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Scn7aB1AYL1 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Scn7aB1AYL1 CT010478.1-201ENSMUST00000220747 2787 ntBASIC18.05■□□□□ 0.48
Scn7aB1AYL1 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Scn7aB1AYL1 Gm45760-201ENSMUST00000212190 1782 ntBASIC18.04■□□□□ 0.48
Scn7aB1AYL1 Gm14723-201ENSMUST00000118686 215 ntBASIC18.04■□□□□ 0.48
Scn7aB1AYL1 Trav4d-2-201ENSMUST00000120914 335 ntBASIC18.04■□□□□ 0.48
Scn7aB1AYL1 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
Scn7aB1AYL1 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Scn7aB1AYL1 Gm37922-201ENSMUST00000195596 455 ntBASIC18.04■□□□□ 0.48
Scn7aB1AYL1 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Scn7aB1AYL1 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
Scn7aB1AYL1 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Scn7aB1AYL1 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Scn7aB1AYL1 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Scn7aB1AYL1 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Scn7aB1AYL1 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Scn7aB1AYL1 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Scn7aB1AYL1 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Scn7aB1AYL1 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Scn7aB1AYL1 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
Scn7aB1AYL1 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC18.03■□□□□ 0.48
Scn7aB1AYL1 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Scn7aB1AYL1 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Scn7aB1AYL1 Gm11793-201ENSMUST00000120433 981 ntBASIC18.03■□□□□ 0.48
Scn7aB1AYL1 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC18.03■□□□□ 0.48
Scn7aB1AYL1 Itm2b-204ENSMUST00000228637 783 ntBASIC18.03■□□□□ 0.48
Scn7aB1AYL1 Mrap-201ENSMUST00000038197 1001 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Scn7aB1AYL1 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
Scn7aB1AYL1 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC18.03■□□□□ 0.48
Scn7aB1AYL1 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Scn7aB1AYL1 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Scn7aB1AYL1 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Scn7aB1AYL1 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Scn7aB1AYL1 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Scn7aB1AYL1 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Scn7aB1AYL1 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC18.03■□□□□ 0.48
Scn7aB1AYL1 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Scn7aB1AYL1 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Scn7aB1AYL1 Ablim2-203ENSMUST00000114203 1333 ntTSL 5 BASIC18.03■□□□□ 0.48
Scn7aB1AYL1 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC18.03■□□□□ 0.48
Scn7aB1AYL1 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Scn7aB1AYL1 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Scn7aB1AYL1 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Scn7aB1AYL1 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC18.03■□□□□ 0.48
Scn7aB1AYL1 Gm16425-201ENSMUST00000118143 3130 ntBASIC18.03■□□□□ 0.48
Scn7aB1AYL1 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC18.03■□□□□ 0.48
Scn7aB1AYL1 Fkbp2-202ENSMUST00000177752 627 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Scn7aB1AYL1 Rn7sk-201ENSMUST00000083103 331 ntBASIC18.03■□□□□ 0.48
Scn7aB1AYL1 Gm26315-201ENSMUST00000083890 321 ntBASIC18.03■□□□□ 0.48
Scn7aB1AYL1 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Scn7aB1AYL1 Gm8706-201ENSMUST00000197372 1491 ntBASIC18.02■□□□□ 0.48
Scn7aB1AYL1 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC18.02■□□□□ 0.48
Scn7aB1AYL1 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC18.02■□□□□ 0.48
Scn7aB1AYL1 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
Scn7aB1AYL1 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Scn7aB1AYL1 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Scn7aB1AYL1 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Scn7aB1AYL1 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.47
Scn7aB1AYL1 Hspb9-201ENSMUST00000017976 652 ntAPPRIS ALT2 BASIC18.02■□□□□ 0.47
Scn7aB1AYL1 Gm26927-201ENSMUST00000182385 965 ntBASIC18.02■□□□□ 0.47
Scn7aB1AYL1 Gm12057-202ENSMUST00000189990 882 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.47
Scn7aB1AYL1 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
Scn7aB1AYL1 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Scn7aB1AYL1 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Scn7aB1AYL1 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Scn7aB1AYL1 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.47
Scn7aB1AYL1 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Scn7aB1AYL1 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
Scn7aB1AYL1 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC18.02■□□□□ 0.47
Scn7aB1AYL1 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Scn7aB1AYL1 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Scn7aB1AYL1 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Scn7aB1AYL1 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
Scn7aB1AYL1 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC18.01■□□□□ 0.47
Scn7aB1AYL1 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Scn7aB1AYL1 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC18.01■□□□□ 0.47
Scn7aB1AYL1 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC18.01■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 53.2 ms