Protein–RNA interactions for Protein: A7VMS2

Gm11127, MHC classIb T15, mousemouse

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm11127A7VMS2 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Gm11127A7VMS2 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Gm11127A7VMS2 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Gm11127A7VMS2 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC12.67□□□□□ -0.38
Gm11127A7VMS2 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Gm11127A7VMS2 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Gm11127A7VMS2 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Gm11127A7VMS2 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Gm11127A7VMS2 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Gm11127A7VMS2 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC12.67□□□□□ -0.38
Gm11127A7VMS2 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Gm11127A7VMS2 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Gm11127A7VMS2 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Gm11127A7VMS2 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Gm11127A7VMS2 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Gm11127A7VMS2 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Gm11127A7VMS2 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Gm11127A7VMS2 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC12.67□□□□□ -0.38
Gm11127A7VMS2 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC12.67□□□□□ -0.38
Gm11127A7VMS2 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Gm11127A7VMS2 Gm7230-201ENSMUST00000173026 815 ntBASIC12.67□□□□□ -0.38
Gm11127A7VMS2 Gm6550-201ENSMUST00000187574 993 ntBASIC12.67□□□□□ -0.38
Gm11127A7VMS2 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Gm11127A7VMS2 Gm5864-201ENSMUST00000202263 970 ntBASIC12.67□□□□□ -0.38
Gm11127A7VMS2 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC12.67□□□□□ -0.38
Gm11127A7VMS2 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC12.67□□□□□ -0.38
Gm11127A7VMS2 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Gm11127A7VMS2 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Gm11127A7VMS2 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Gm11127A7VMS2 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Gm11127A7VMS2 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Gm11127A7VMS2 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC12.67□□□□□ -0.38
Gm11127A7VMS2 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Gm11127A7VMS2 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Gm11127A7VMS2 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Gm11127A7VMS2 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Gm11127A7VMS2 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Gm11127A7VMS2 Gm5639-201ENSMUST00000122305 2403 ntBASIC12.67□□□□□ -0.38
Gm11127A7VMS2 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC12.67□□□□□ -0.38
Gm11127A7VMS2 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Gm11127A7VMS2 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Gm11127A7VMS2 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Gm11127A7VMS2 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Gm11127A7VMS2 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Gm11127A7VMS2 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Gm11127A7VMS2 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Gm11127A7VMS2 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Gm11127A7VMS2 AC126250.1-201ENSMUST00000228343 1768 ntBASIC12.66□□□□□ -0.38
Gm11127A7VMS2 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Gm11127A7VMS2 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Gm11127A7VMS2 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Gm11127A7VMS2 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Gm11127A7VMS2 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC12.66□□□□□ -0.38
Gm11127A7VMS2 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Gm11127A7VMS2 Gm7153-201ENSMUST00000117092 455 ntBASIC12.66□□□□□ -0.38
Gm11127A7VMS2 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC12.66□□□□□ -0.38
Gm11127A7VMS2 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Gm11127A7VMS2 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Gm11127A7VMS2 Gm45167-201ENSMUST00000208007 322 ntBASIC12.66□□□□□ -0.38
Gm11127A7VMS2 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Gm11127A7VMS2 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Gm11127A7VMS2 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Gm11127A7VMS2 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Gm11127A7VMS2 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Gm11127A7VMS2 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC12.66□□□□□ -0.38
Gm11127A7VMS2 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Gm11127A7VMS2 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Gm11127A7VMS2 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Gm11127A7VMS2 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Gm11127A7VMS2 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC12.66□□□□□ -0.38
Gm11127A7VMS2 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Gm11127A7VMS2 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Gm11127A7VMS2 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Gm11127A7VMS2 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Gm11127A7VMS2 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Gm11127A7VMS2 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Gm11127A7VMS2 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Gm11127A7VMS2 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Gm11127A7VMS2 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Gm11127A7VMS2 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Gm11127A7VMS2 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC12.65□□□□□ -0.38
Gm11127A7VMS2 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Gm11127A7VMS2 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Gm11127A7VMS2 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Gm11127A7VMS2 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Gm11127A7VMS2 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Gm11127A7VMS2 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Gm11127A7VMS2 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Gm11127A7VMS2 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Gm11127A7VMS2 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Gm11127A7VMS2 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Gm11127A7VMS2 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Gm11127A7VMS2 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Gm11127A7VMS2 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Gm11127A7VMS2 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Gm11127A7VMS2 Gm7862-201ENSMUST00000121461 292 ntBASIC12.65□□□□□ -0.38
Gm11127A7VMS2 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC12.65□□□□□ -0.38
Gm11127A7VMS2 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC12.65□□□□□ -0.38
Gm11127A7VMS2 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC12.65□□□□□ -0.38
Gm11127A7VMS2 Mir8098-201ENSMUST00000184011 137 ntBASIC12.65□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms