Protein–RNA interactions for Protein: A0A140LIT1

Ccdc194, Coiled-coil domain-containing protein 194, mousemouse

Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc194A0A140LIT1 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ccdc194A0A140LIT1 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Ccdc194A0A140LIT1 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Ccdc194A0A140LIT1 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Ccdc194A0A140LIT1 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ccdc194A0A140LIT1 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ccdc194A0A140LIT1 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ccdc194A0A140LIT1 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ccdc194A0A140LIT1 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ccdc194A0A140LIT1 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Ccdc194A0A140LIT1 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
Ccdc194A0A140LIT1 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ccdc194A0A140LIT1 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC14.22□□□□□ -0.13
Ccdc194A0A140LIT1 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ccdc194A0A140LIT1 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC14.22□□□□□ -0.13
Ccdc194A0A140LIT1 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC14.22□□□□□ -0.13
Ccdc194A0A140LIT1 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC14.22□□□□□ -0.13
Ccdc194A0A140LIT1 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC14.22□□□□□ -0.13
Ccdc194A0A140LIT1 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC14.22□□□□□ -0.13
Ccdc194A0A140LIT1 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ccdc194A0A140LIT1 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ccdc194A0A140LIT1 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ccdc194A0A140LIT1 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ccdc194A0A140LIT1 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ccdc194A0A140LIT1 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Ccdc194A0A140LIT1 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ccdc194A0A140LIT1 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Ccdc194A0A140LIT1 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ccdc194A0A140LIT1 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ccdc194A0A140LIT1 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Ccdc194A0A140LIT1 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ccdc194A0A140LIT1 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Ccdc194A0A140LIT1 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Ccdc194A0A140LIT1 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Ccdc194A0A140LIT1 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ccdc194A0A140LIT1 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ccdc194A0A140LIT1 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ccdc194A0A140LIT1 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Ccdc194A0A140LIT1 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ccdc194A0A140LIT1 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ccdc194A0A140LIT1 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC14.21□□□□□ -0.13
Ccdc194A0A140LIT1 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC14.21□□□□□ -0.13
Ccdc194A0A140LIT1 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Ccdc194A0A140LIT1 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC14.21□□□□□ -0.13
Ccdc194A0A140LIT1 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ccdc194A0A140LIT1 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC14.21□□□□□ -0.13
Ccdc194A0A140LIT1 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ccdc194A0A140LIT1 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC14.21□□□□□ -0.13
Ccdc194A0A140LIT1 AC174742.1-201ENSMUST00000218272 304 ntBASIC14.21□□□□□ -0.13
Ccdc194A0A140LIT1 AC159295.1-201ENSMUST00000225326 940 ntBASIC14.21□□□□□ -0.13
Ccdc194A0A140LIT1 CT025555.1-201ENSMUST00000225901 1217 ntBASIC14.21□□□□□ -0.13
Ccdc194A0A140LIT1 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ccdc194A0A140LIT1 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ccdc194A0A140LIT1 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.14
Ccdc194A0A140LIT1 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.14
Ccdc194A0A140LIT1 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Ccdc194A0A140LIT1 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Ccdc194A0A140LIT1 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC14.2□□□□□ -0.14
Ccdc194A0A140LIT1 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ccdc194A0A140LIT1 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ccdc194A0A140LIT1 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ccdc194A0A140LIT1 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ccdc194A0A140LIT1 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Ccdc194A0A140LIT1 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Ccdc194A0A140LIT1 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Ccdc194A0A140LIT1 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Ccdc194A0A140LIT1 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Ccdc194A0A140LIT1 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC14.2□□□□□ -0.14
Ccdc194A0A140LIT1 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ccdc194A0A140LIT1 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Ccdc194A0A140LIT1 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Ccdc194A0A140LIT1 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Ccdc194A0A140LIT1 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Ccdc194A0A140LIT1 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ccdc194A0A140LIT1 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ccdc194A0A140LIT1 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ccdc194A0A140LIT1 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Ccdc194A0A140LIT1 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Ccdc194A0A140LIT1 AC166574.6-201ENSMUST00000227889 1806 ntBASIC14.2□□□□□ -0.14
Ccdc194A0A140LIT1 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ccdc194A0A140LIT1 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ccdc194A0A140LIT1 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ccdc194A0A140LIT1 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ccdc194A0A140LIT1 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Ccdc194A0A140LIT1 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Ccdc194A0A140LIT1 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Ccdc194A0A140LIT1 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ccdc194A0A140LIT1 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ccdc194A0A140LIT1 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
Ccdc194A0A140LIT1 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC14.19□□□□□ -0.14
Ccdc194A0A140LIT1 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC14.19□□□□□ -0.14
Ccdc194A0A140LIT1 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC14.19□□□□□ -0.14
Ccdc194A0A140LIT1 Gm15483-201ENSMUST00000120338 456 ntBASIC14.19□□□□□ -0.14
Ccdc194A0A140LIT1 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC14.19□□□□□ -0.14
Ccdc194A0A140LIT1 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC14.19□□□□□ -0.14
Ccdc194A0A140LIT1 Gm9727-201ENSMUST00000161387 555 ntBASIC14.19□□□□□ -0.14
Ccdc194A0A140LIT1 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Ccdc194A0A140LIT1 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC14.19□□□□□ -0.14
Ccdc194A0A140LIT1 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC14.19□□□□□ -0.14
Ccdc194A0A140LIT1 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC14.19□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms