Protein–RNA interactions for Protein: A0A075B6B2

Trav6n-6, T cell receptor alpha variable 6N-6 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6n-6A0A075B6B2 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.7
Trav6n-6A0A075B6B2 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC10.68□□□□□ -0.7
Trav6n-6A0A075B6B2 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
Trav6n-6A0A075B6B2 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
Trav6n-6A0A075B6B2 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC10.68□□□□□ -0.7
Trav6n-6A0A075B6B2 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav6n-6A0A075B6B2 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav6n-6A0A075B6B2 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav6n-6A0A075B6B2 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav6n-6A0A075B6B2 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav6n-6A0A075B6B2 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav6n-6A0A075B6B2 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav6n-6A0A075B6B2 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC10.68□□□□□ -0.7
Trav6n-6A0A075B6B2 Gm11185-201ENSMUST00000117732 1007 ntBASIC10.68□□□□□ -0.7
Trav6n-6A0A075B6B2 Gm6184-201ENSMUST00000120403 1261 ntBASIC10.68□□□□□ -0.7
Trav6n-6A0A075B6B2 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC10.68□□□□□ -0.7
Trav6n-6A0A075B6B2 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Trav6n-6A0A075B6B2 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC10.68□□□□□ -0.7
Trav6n-6A0A075B6B2 Mir5131-201ENSMUST00000175426 93 ntBASIC10.68□□□□□ -0.7
Trav6n-6A0A075B6B2 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav6n-6A0A075B6B2 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC10.68□□□□□ -0.7
Trav6n-6A0A075B6B2 AC122024.2-201ENSMUST00000220086 871 ntBASIC10.68□□□□□ -0.7
Trav6n-6A0A075B6B2 AC138767.1-201ENSMUST00000222661 415 ntBASIC10.68□□□□□ -0.7
Trav6n-6A0A075B6B2 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC10.68□□□□□ -0.7
Trav6n-6A0A075B6B2 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC10.68□□□□□ -0.7
Trav6n-6A0A075B6B2 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav6n-6A0A075B6B2 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC10.68□□□□□ -0.7
Trav6n-6A0A075B6B2 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav6n-6A0A075B6B2 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Trav6n-6A0A075B6B2 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav6n-6A0A075B6B2 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Trav6n-6A0A075B6B2 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Trav6n-6A0A075B6B2 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Trav6n-6A0A075B6B2 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav6n-6A0A075B6B2 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav6n-6A0A075B6B2 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Trav6n-6A0A075B6B2 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Trav6n-6A0A075B6B2 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC10.68□□□□□ -0.7
Trav6n-6A0A075B6B2 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav6n-6A0A075B6B2 Xndc1-201ENSMUST00000094130 2298 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav6n-6A0A075B6B2 AC157650.3-201ENSMUST00000225058 1476 ntBASIC10.68□□□□□ -0.7
Trav6n-6A0A075B6B2 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav6n-6A0A075B6B2 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav6n-6A0A075B6B2 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav6n-6A0A075B6B2 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trav6n-6A0A075B6B2 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trav6n-6A0A075B6B2 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC10.67□□□□□ -0.7
Trav6n-6A0A075B6B2 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trav6n-6A0A075B6B2 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC10.67□□□□□ -0.7
Trav6n-6A0A075B6B2 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Trav6n-6A0A075B6B2 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trav6n-6A0A075B6B2 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trav6n-6A0A075B6B2 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trav6n-6A0A075B6B2 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trav6n-6A0A075B6B2 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Trav6n-6A0A075B6B2 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trav6n-6A0A075B6B2 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trav6n-6A0A075B6B2 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trav6n-6A0A075B6B2 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC10.67□□□□□ -0.7
Trav6n-6A0A075B6B2 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC10.67□□□□□ -0.7
Trav6n-6A0A075B6B2 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC10.67□□□□□ -0.7
Trav6n-6A0A075B6B2 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC10.67□□□□□ -0.7
Trav6n-6A0A075B6B2 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Trav6n-6A0A075B6B2 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC10.67□□□□□ -0.7
Trav6n-6A0A075B6B2 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC10.67□□□□□ -0.7
Trav6n-6A0A075B6B2 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC10.67□□□□□ -0.7
Trav6n-6A0A075B6B2 Gm7556-201ENSMUST00000201178 1084 ntBASIC10.67□□□□□ -0.7
Trav6n-6A0A075B6B2 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC10.67□□□□□ -0.7
Trav6n-6A0A075B6B2 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trav6n-6A0A075B6B2 AC160980.1-201ENSMUST00000224136 970 ntBASIC10.67□□□□□ -0.7
Trav6n-6A0A075B6B2 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trav6n-6A0A075B6B2 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC10.67□□□□□ -0.7
Trav6n-6A0A075B6B2 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Trav6n-6A0A075B6B2 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trav6n-6A0A075B6B2 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trav6n-6A0A075B6B2 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Trav6n-6A0A075B6B2 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trav6n-6A0A075B6B2 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trav6n-6A0A075B6B2 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trav6n-6A0A075B6B2 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Trav6n-6A0A075B6B2 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trav6n-6A0A075B6B2 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
Trav6n-6A0A075B6B2 Grk6-205ENSMUST00000224653 2976 ntBASIC10.67□□□□□ -0.7
Trav6n-6A0A075B6B2 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
Trav6n-6A0A075B6B2 Hgs-202ENSMUST00000106203 2901 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
Trav6n-6A0A075B6B2 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trav6n-6A0A075B6B2 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trav6n-6A0A075B6B2 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Trav6n-6A0A075B6B2 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trav6n-6A0A075B6B2 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trav6n-6A0A075B6B2 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Trav6n-6A0A075B6B2 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trav6n-6A0A075B6B2 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trav6n-6A0A075B6B2 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trav6n-6A0A075B6B2 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trav6n-6A0A075B6B2 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Trav6n-6A0A075B6B2 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trav6n-6A0A075B6B2 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Trav6n-6A0A075B6B2 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trav6n-6A0A075B6B2 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms