Protein–RNA interactions for Protein: Q9Z0D9

Cx3cr1, CX3C chemokine receptor 1, mousemouse

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cx3cr1Q9Z0D9 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Cx3cr1Q9Z0D9 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC12.12□□□□□ -0.47
Cx3cr1Q9Z0D9 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Cx3cr1Q9Z0D9 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cx3cr1Q9Z0D9 Gm2420-202ENSMUST00000202224 2249 ntBASIC12.12□□□□□ -0.47
Cx3cr1Q9Z0D9 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Cx3cr1Q9Z0D9 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC12.12□□□□□ -0.47
Cx3cr1Q9Z0D9 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cx3cr1Q9Z0D9 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
Cx3cr1Q9Z0D9 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cx3cr1Q9Z0D9 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Cx3cr1Q9Z0D9 Acot6-202ENSMUST00000222921 3622 ntBASIC12.12□□□□□ -0.47
Cx3cr1Q9Z0D9 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cx3cr1Q9Z0D9 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cx3cr1Q9Z0D9 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cx3cr1Q9Z0D9 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Cx3cr1Q9Z0D9 AC119177.1-201ENSMUST00000227647 1332 ntBASIC12.11□□□□□ -0.47
Cx3cr1Q9Z0D9 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cx3cr1Q9Z0D9 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cx3cr1Q9Z0D9 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Cx3cr1Q9Z0D9 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC12.11□□□□□ -0.47
Cx3cr1Q9Z0D9 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cx3cr1Q9Z0D9 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Cx3cr1Q9Z0D9 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Cx3cr1Q9Z0D9 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cx3cr1Q9Z0D9 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Cx3cr1Q9Z0D9 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Cx3cr1Q9Z0D9 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cx3cr1Q9Z0D9 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cx3cr1Q9Z0D9 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cx3cr1Q9Z0D9 Tcf21-202ENSMUST00000218002 1788 ntBASIC12.11□□□□□ -0.47
Cx3cr1Q9Z0D9 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cx3cr1Q9Z0D9 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Cx3cr1Q9Z0D9 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cx3cr1Q9Z0D9 Gm25990-201ENSMUST00000102440 86 ntBASIC12.11□□□□□ -0.47
Cx3cr1Q9Z0D9 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cx3cr1Q9Z0D9 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC12.11□□□□□ -0.47
Cx3cr1Q9Z0D9 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Cx3cr1Q9Z0D9 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Cx3cr1Q9Z0D9 Gm9182-201ENSMUST00000217829 639 ntBASIC12.11□□□□□ -0.47
Cx3cr1Q9Z0D9 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cx3cr1Q9Z0D9 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cx3cr1Q9Z0D9 Gm6198-201ENSMUST00000191337 2929 ntBASIC12.11□□□□□ -0.47
Cx3cr1Q9Z0D9 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cx3cr1Q9Z0D9 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cx3cr1Q9Z0D9 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC12.11□□□□□ -0.47
Cx3cr1Q9Z0D9 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Cx3cr1Q9Z0D9 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Cx3cr1Q9Z0D9 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cx3cr1Q9Z0D9 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cx3cr1Q9Z0D9 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cx3cr1Q9Z0D9 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cx3cr1Q9Z0D9 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cx3cr1Q9Z0D9 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cx3cr1Q9Z0D9 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cx3cr1Q9Z0D9 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Cx3cr1Q9Z0D9 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cx3cr1Q9Z0D9 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cx3cr1Q9Z0D9 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC12.1□□□□□ -0.47
Cx3cr1Q9Z0D9 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC12.1□□□□□ -0.47
Cx3cr1Q9Z0D9 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC12.1□□□□□ -0.47
Cx3cr1Q9Z0D9 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cx3cr1Q9Z0D9 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cx3cr1Q9Z0D9 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cx3cr1Q9Z0D9 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Cx3cr1Q9Z0D9 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Cx3cr1Q9Z0D9 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC12.1□□□□□ -0.47
Cx3cr1Q9Z0D9 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cx3cr1Q9Z0D9 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Cx3cr1Q9Z0D9 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC12.1□□□□□ -0.47
Cx3cr1Q9Z0D9 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cx3cr1Q9Z0D9 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Cx3cr1Q9Z0D9 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cx3cr1Q9Z0D9 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC12.1□□□□□ -0.47
Cx3cr1Q9Z0D9 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Cx3cr1Q9Z0D9 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cx3cr1Q9Z0D9 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Cx3cr1Q9Z0D9 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cx3cr1Q9Z0D9 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cx3cr1Q9Z0D9 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Cx3cr1Q9Z0D9 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC12.1□□□□□ -0.47
Cx3cr1Q9Z0D9 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cx3cr1Q9Z0D9 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cx3cr1Q9Z0D9 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cx3cr1Q9Z0D9 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cx3cr1Q9Z0D9 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Cx3cr1Q9Z0D9 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cx3cr1Q9Z0D9 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Cx3cr1Q9Z0D9 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cx3cr1Q9Z0D9 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC12.09□□□□□ -0.47
Cx3cr1Q9Z0D9 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cx3cr1Q9Z0D9 Gm12626-201ENSMUST00000117339 1983 ntBASIC12.09□□□□□ -0.47
Cx3cr1Q9Z0D9 Gm12623-201ENSMUST00000119849 1983 ntBASIC12.09□□□□□ -0.47
Cx3cr1Q9Z0D9 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Cx3cr1Q9Z0D9 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cx3cr1Q9Z0D9 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Cx3cr1Q9Z0D9 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cx3cr1Q9Z0D9 Gm14859-201ENSMUST00000117752 357 ntBASIC12.09□□□□□ -0.47
Cx3cr1Q9Z0D9 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC12.09□□□□□ -0.47
Cx3cr1Q9Z0D9 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 45.9 ms