Protein–RNA interactions for Protein: Q9WUH2

Lhx9, LIM/homeobox protein Lhx9, mousemouse

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx9Q9WUH2 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Lhx9Q9WUH2 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Lhx9Q9WUH2 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Lhx9Q9WUH2 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Lhx9Q9WUH2 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Lhx9Q9WUH2 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Lhx9Q9WUH2 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Lhx9Q9WUH2 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Lhx9Q9WUH2 Gm5320-201ENSMUST00000207163 1519 ntBASIC13.59□□□□□ -0.23
Lhx9Q9WUH2 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Lhx9Q9WUH2 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Lhx9Q9WUH2 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC13.59□□□□□ -0.23
Lhx9Q9WUH2 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Lhx9Q9WUH2 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Lhx9Q9WUH2 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Lhx9Q9WUH2 Syt7-205ENSMUST00000224135 1557 ntBASIC13.59□□□□□ -0.23
Lhx9Q9WUH2 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Lhx9Q9WUH2 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Lhx9Q9WUH2 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Lhx9Q9WUH2 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Lhx9Q9WUH2 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Lhx9Q9WUH2 Gm45760-201ENSMUST00000212190 1782 ntBASIC13.59□□□□□ -0.23
Lhx9Q9WUH2 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Lhx9Q9WUH2 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Lhx9Q9WUH2 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Lhx9Q9WUH2 Gm7488-201ENSMUST00000117148 684 ntBASIC13.59□□□□□ -0.23
Lhx9Q9WUH2 Mir1897-201ENSMUST00000122581 272 ntBASIC13.59□□□□□ -0.23
Lhx9Q9WUH2 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Lhx9Q9WUH2 Gm44855-201ENSMUST00000205725 362 ntBASIC13.59□□□□□ -0.23
Lhx9Q9WUH2 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Lhx9Q9WUH2 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Lhx9Q9WUH2 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Lhx9Q9WUH2 Sorbs3-204ENSMUST00000227929 2460 ntBASIC13.59□□□□□ -0.23
Lhx9Q9WUH2 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Lhx9Q9WUH2 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Lhx9Q9WUH2 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC13.59□□□□□ -0.23
Lhx9Q9WUH2 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC13.59□□□□□ -0.23
Lhx9Q9WUH2 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC13.59□□□□□ -0.23
Lhx9Q9WUH2 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Lhx9Q9WUH2 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Lhx9Q9WUH2 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC13.58□□□□□ -0.23
Lhx9Q9WUH2 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Lhx9Q9WUH2 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Lhx9Q9WUH2 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.23
Lhx9Q9WUH2 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Lhx9Q9WUH2 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Lhx9Q9WUH2 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Lhx9Q9WUH2 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Lhx9Q9WUH2 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Lhx9Q9WUH2 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Lhx9Q9WUH2 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Lhx9Q9WUH2 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Lhx9Q9WUH2 Gm4204-201ENSMUST00000110798 1231 ntBASIC13.58□□□□□ -0.24
Lhx9Q9WUH2 Gm6222-201ENSMUST00000120787 396 ntBASIC13.58□□□□□ -0.24
Lhx9Q9WUH2 Gm11424-201ENSMUST00000121929 829 ntBASIC13.58□□□□□ -0.24
Lhx9Q9WUH2 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Lhx9Q9WUH2 H2-Pa-201ENSMUST00000182803 626 ntBASIC13.58□□□□□ -0.24
Lhx9Q9WUH2 Gtpbp10-211ENSMUST00000198799 648 ntBASIC13.58□□□□□ -0.24
Lhx9Q9WUH2 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Lhx9Q9WUH2 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Lhx9Q9WUH2 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Lhx9Q9WUH2 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC13.58□□□□□ -0.24
Lhx9Q9WUH2 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Lhx9Q9WUH2 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Lhx9Q9WUH2 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Lhx9Q9WUH2 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Lhx9Q9WUH2 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Lhx9Q9WUH2 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Lhx9Q9WUH2 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Lhx9Q9WUH2 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Lhx9Q9WUH2 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Lhx9Q9WUH2 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Lhx9Q9WUH2 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Lhx9Q9WUH2 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Lhx9Q9WUH2 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC13.57□□□□□ -0.24
Lhx9Q9WUH2 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Lhx9Q9WUH2 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Lhx9Q9WUH2 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Lhx9Q9WUH2 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Lhx9Q9WUH2 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Lhx9Q9WUH2 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
Lhx9Q9WUH2 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Lhx9Q9WUH2 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Lhx9Q9WUH2 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Lhx9Q9WUH2 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Lhx9Q9WUH2 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Lhx9Q9WUH2 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Lhx9Q9WUH2 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC13.57□□□□□ -0.24
Lhx9Q9WUH2 Gm3365-201ENSMUST00000216296 1480 ntBASIC13.57□□□□□ -0.24
Lhx9Q9WUH2 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC13.57□□□□□ -0.24
Lhx9Q9WUH2 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Lhx9Q9WUH2 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Lhx9Q9WUH2 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC13.57□□□□□ -0.24
Lhx9Q9WUH2 Gm15653-201ENSMUST00000119247 907 ntBASIC13.57□□□□□ -0.24
Lhx9Q9WUH2 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Lhx9Q9WUH2 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC13.57□□□□□ -0.24
Lhx9Q9WUH2 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC13.57□□□□□ -0.24
Lhx9Q9WUH2 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC13.57□□□□□ -0.24
Lhx9Q9WUH2 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC13.57□□□□□ -0.24
Lhx9Q9WUH2 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC13.57□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 37 ms