Protein–RNA interactions for Protein: Q9R0X5

Rpgr, X-linked retinitis pigmentosa GTPase regulator, mousemouse

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RpgrQ9R0X5 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
RpgrQ9R0X5 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
RpgrQ9R0X5 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
RpgrQ9R0X5 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
RpgrQ9R0X5 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
RpgrQ9R0X5 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
RpgrQ9R0X5 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
RpgrQ9R0X5 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
RpgrQ9R0X5 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC14.56□□□□□ -0.08
RpgrQ9R0X5 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
RpgrQ9R0X5 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC14.56□□□□□ -0.08
RpgrQ9R0X5 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
RpgrQ9R0X5 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC14.56□□□□□ -0.08
RpgrQ9R0X5 Gm44945-201ENSMUST00000206764 1187 ntBASIC14.56□□□□□ -0.08
RpgrQ9R0X5 Ndufaf2-202ENSMUST00000223734 556 ntBASIC14.56□□□□□ -0.08
RpgrQ9R0X5 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
RpgrQ9R0X5 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
RpgrQ9R0X5 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
RpgrQ9R0X5 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
RpgrQ9R0X5 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC14.56□□□□□ -0.08
RpgrQ9R0X5 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC14.56□□□□□ -0.08
RpgrQ9R0X5 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
RpgrQ9R0X5 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
RpgrQ9R0X5 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
RpgrQ9R0X5 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
RpgrQ9R0X5 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
RpgrQ9R0X5 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
RpgrQ9R0X5 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
RpgrQ9R0X5 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
RpgrQ9R0X5 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
RpgrQ9R0X5 Ankra2-208ENSMUST00000226100 1476 ntBASIC14.56□□□□□ -0.08
RpgrQ9R0X5 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
RpgrQ9R0X5 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC14.56□□□□□ -0.08
RpgrQ9R0X5 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
RpgrQ9R0X5 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
RpgrQ9R0X5 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
RpgrQ9R0X5 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
RpgrQ9R0X5 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC14.56□□□□□ -0.08
RpgrQ9R0X5 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
RpgrQ9R0X5 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
RpgrQ9R0X5 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
RpgrQ9R0X5 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC14.55□□□□□ -0.08
RpgrQ9R0X5 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC14.55□□□□□ -0.08
RpgrQ9R0X5 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
RpgrQ9R0X5 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
RpgrQ9R0X5 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC14.55□□□□□ -0.08
RpgrQ9R0X5 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC14.55□□□□□ -0.08
RpgrQ9R0X5 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC14.55□□□□□ -0.08
RpgrQ9R0X5 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
RpgrQ9R0X5 Gm14494-201ENSMUST00000118786 435 ntBASIC14.55□□□□□ -0.08
RpgrQ9R0X5 Gm13597-201ENSMUST00000121239 375 ntBASIC14.55□□□□□ -0.08
RpgrQ9R0X5 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
RpgrQ9R0X5 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
RpgrQ9R0X5 Gm38197-201ENSMUST00000192320 2122 ntBASIC14.55□□□□□ -0.08
RpgrQ9R0X5 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC14.55□□□□□ -0.08
RpgrQ9R0X5 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
RpgrQ9R0X5 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
RpgrQ9R0X5 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
RpgrQ9R0X5 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC14.55□□□□□ -0.08
RpgrQ9R0X5 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
RpgrQ9R0X5 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC14.55□□□□□ -0.08
RpgrQ9R0X5 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
RpgrQ9R0X5 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
RpgrQ9R0X5 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
RpgrQ9R0X5 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
RpgrQ9R0X5 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
RpgrQ9R0X5 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
RpgrQ9R0X5 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC14.55□□□□□ -0.08
RpgrQ9R0X5 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
RpgrQ9R0X5 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
RpgrQ9R0X5 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
RpgrQ9R0X5 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
RpgrQ9R0X5 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
RpgrQ9R0X5 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
RpgrQ9R0X5 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC14.54□□□□□ -0.08
RpgrQ9R0X5 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
RpgrQ9R0X5 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
RpgrQ9R0X5 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC14.54□□□□□ -0.08
RpgrQ9R0X5 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
RpgrQ9R0X5 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
RpgrQ9R0X5 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
RpgrQ9R0X5 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC14.54□□□□□ -0.08
RpgrQ9R0X5 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
RpgrQ9R0X5 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
RpgrQ9R0X5 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
RpgrQ9R0X5 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
RpgrQ9R0X5 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
RpgrQ9R0X5 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
RpgrQ9R0X5 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
RpgrQ9R0X5 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
RpgrQ9R0X5 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
RpgrQ9R0X5 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
RpgrQ9R0X5 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
RpgrQ9R0X5 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
RpgrQ9R0X5 Gm37844-201ENSMUST00000192473 4097 ntBASIC14.54□□□□□ -0.08
RpgrQ9R0X5 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
RpgrQ9R0X5 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
RpgrQ9R0X5 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
RpgrQ9R0X5 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
RpgrQ9R0X5 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 53.5 ms