Protein–RNA interactions for Protein: Q9QZS2

Rnf4, E3 ubiquitin-protein ligase RNF4, mousemouse

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf4Q9QZS2 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Rnf4Q9QZS2 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
Rnf4Q9QZS2 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Rnf4Q9QZS2 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC14.46□□□□□ -0.09
Rnf4Q9QZS2 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
Rnf4Q9QZS2 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC14.46□□□□□ -0.09
Rnf4Q9QZS2 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
Rnf4Q9QZS2 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Rnf4Q9QZS2 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC14.46□□□□□ -0.09
Rnf4Q9QZS2 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Rnf4Q9QZS2 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Rnf4Q9QZS2 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Rnf4Q9QZS2 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
Rnf4Q9QZS2 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Rnf4Q9QZS2 AA414768-201ENSMUST00000121924 1257 ntBASIC14.46□□□□□ -0.09
Rnf4Q9QZS2 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Rnf4Q9QZS2 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Rnf4Q9QZS2 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Rnf4Q9QZS2 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Rnf4Q9QZS2 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Rnf4Q9QZS2 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Rnf4Q9QZS2 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Rnf4Q9QZS2 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Rnf4Q9QZS2 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Rnf4Q9QZS2 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Rnf4Q9QZS2 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Rnf4Q9QZS2 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Rnf4Q9QZS2 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
Rnf4Q9QZS2 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.1
Rnf4Q9QZS2 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Rnf4Q9QZS2 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC14.46□□□□□ -0.1
Rnf4Q9QZS2 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC14.46□□□□□ -0.1
Rnf4Q9QZS2 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Rnf4Q9QZS2 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rnf4Q9QZS2 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Rnf4Q9QZS2 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC14.45□□□□□ -0.1
Rnf4Q9QZS2 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rnf4Q9QZS2 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Rnf4Q9QZS2 Gm20632-201ENSMUST00000176760 2427 ntBASIC14.45□□□□□ -0.1
Rnf4Q9QZS2 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC14.45□□□□□ -0.1
Rnf4Q9QZS2 Gm37861-201ENSMUST00000193534 2869 ntBASIC14.45□□□□□ -0.1
Rnf4Q9QZS2 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC14.45□□□□□ -0.1
Rnf4Q9QZS2 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rnf4Q9QZS2 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Rnf4Q9QZS2 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rnf4Q9QZS2 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rnf4Q9QZS2 Gm15593-201ENSMUST00000122085 1008 ntBASIC14.45□□□□□ -0.1
Rnf4Q9QZS2 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC14.45□□□□□ -0.1
Rnf4Q9QZS2 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Rnf4Q9QZS2 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rnf4Q9QZS2 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rnf4Q9QZS2 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Rnf4Q9QZS2 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rnf4Q9QZS2 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rnf4Q9QZS2 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rnf4Q9QZS2 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rnf4Q9QZS2 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Rnf4Q9QZS2 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rnf4Q9QZS2 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rnf4Q9QZS2 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rnf4Q9QZS2 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC14.45□□□□□ -0.1
Rnf4Q9QZS2 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Rnf4Q9QZS2 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rnf4Q9QZS2 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rnf4Q9QZS2 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Rnf4Q9QZS2 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC14.45□□□□□ -0.1
Rnf4Q9QZS2 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Rnf4Q9QZS2 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rnf4Q9QZS2 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rnf4Q9QZS2 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC14.44□□□□□ -0.1
Rnf4Q9QZS2 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rnf4Q9QZS2 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Rnf4Q9QZS2 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rnf4Q9QZS2 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rnf4Q9QZS2 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rnf4Q9QZS2 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Rnf4Q9QZS2 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rnf4Q9QZS2 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Rnf4Q9QZS2 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rnf4Q9QZS2 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rnf4Q9QZS2 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rnf4Q9QZS2 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rnf4Q9QZS2 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rnf4Q9QZS2 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rnf4Q9QZS2 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
Rnf4Q9QZS2 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Rnf4Q9QZS2 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC14.44□□□□□ -0.1
Rnf4Q9QZS2 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rnf4Q9QZS2 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rnf4Q9QZS2 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rnf4Q9QZS2 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rnf4Q9QZS2 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Rnf4Q9QZS2 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Rnf4Q9QZS2 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rnf4Q9QZS2 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
Rnf4Q9QZS2 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC14.44□□□□□ -0.1
Rnf4Q9QZS2 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC14.44□□□□□ -0.1
Rnf4Q9QZS2 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rnf4Q9QZS2 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC14.44□□□□□ -0.1
Rnf4Q9QZS2 Gm6159-201ENSMUST00000191249 1724 ntBASIC14.44□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms