Protein–RNA interactions for Protein: Q9EQM3

Nkx2-4, Homeobox protein Nkx-2.4, mousemouse

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-4Q9EQM3 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC14.58□□□□□ -0.07
Nkx2-4Q9EQM3 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC14.58□□□□□ -0.07
Nkx2-4Q9EQM3 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Nkx2-4Q9EQM3 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.07
Nkx2-4Q9EQM3 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.07
Nkx2-4Q9EQM3 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Nkx2-4Q9EQM3 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
Nkx2-4Q9EQM3 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Nkx2-4Q9EQM3 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Nkx2-4Q9EQM3 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Nkx2-4Q9EQM3 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Nkx2-4Q9EQM3 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
Nkx2-4Q9EQM3 Gm16177-201ENSMUST00000120728 718 ntBASIC14.58□□□□□ -0.08
Nkx2-4Q9EQM3 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC14.58□□□□□ -0.08
Nkx2-4Q9EQM3 Gm16342-201ENSMUST00000124025 1025 ntBASIC14.58□□□□□ -0.08
Nkx2-4Q9EQM3 Gm12050-201ENSMUST00000127483 615 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Nkx2-4Q9EQM3 Gm26464-201ENSMUST00000157094 305 ntBASIC14.58□□□□□ -0.08
Nkx2-4Q9EQM3 Gm5069-202ENSMUST00000192714 1011 ntBASIC14.58□□□□□ -0.08
Nkx2-4Q9EQM3 Gm37714-201ENSMUST00000194742 342 ntBASIC14.58□□□□□ -0.08
Nkx2-4Q9EQM3 Gm19184-201ENSMUST00000196798 928 ntBASIC14.58□□□□□ -0.08
Nkx2-4Q9EQM3 Tpd52l1-205ENSMUST00000215515 857 ntTSL 2 BASIC14.58□□□□□ -0.08
Nkx2-4Q9EQM3 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
Nkx2-4Q9EQM3 Erich1-201ENSMUST00000110813 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Nkx2-4Q9EQM3 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Nkx2-4Q9EQM3 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Nkx2-4Q9EQM3 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Nkx2-4Q9EQM3 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Nkx2-4Q9EQM3 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
Nkx2-4Q9EQM3 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Nkx2-4Q9EQM3 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Nkx2-4Q9EQM3 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
Nkx2-4Q9EQM3 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Nkx2-4Q9EQM3 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Nkx2-4Q9EQM3 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Nkx2-4Q9EQM3 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Nkx2-4Q9EQM3 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Nkx2-4Q9EQM3 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Nkx2-4Q9EQM3 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Nkx2-4Q9EQM3 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Nkx2-4Q9EQM3 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Nkx2-4Q9EQM3 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Nkx2-4Q9EQM3 Gm43352-201ENSMUST00000196419 3065 ntBASIC14.57□□□□□ -0.08
Nkx2-4Q9EQM3 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC14.57□□□□□ -0.08
Nkx2-4Q9EQM3 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Nkx2-4Q9EQM3 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Nkx2-4Q9EQM3 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC14.57□□□□□ -0.08
Nkx2-4Q9EQM3 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC14.57□□□□□ -0.08
Nkx2-4Q9EQM3 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Nkx2-4Q9EQM3 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Nkx2-4Q9EQM3 Gm38266-201ENSMUST00000194931 421 ntBASIC14.57□□□□□ -0.08
Nkx2-4Q9EQM3 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC14.57□□□□□ -0.08
Nkx2-4Q9EQM3 Gm18934-201ENSMUST00000216671 1044 ntBASIC14.57□□□□□ -0.08
Nkx2-4Q9EQM3 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Nkx2-4Q9EQM3 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Nkx2-4Q9EQM3 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Nkx2-4Q9EQM3 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Nkx2-4Q9EQM3 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Nkx2-4Q9EQM3 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Nkx2-4Q9EQM3 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Nkx2-4Q9EQM3 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Nkx2-4Q9EQM3 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Nkx2-4Q9EQM3 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Nkx2-4Q9EQM3 Gm37812-201ENSMUST00000195216 2475 ntBASIC14.57□□□□□ -0.08
Nkx2-4Q9EQM3 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Nkx2-4Q9EQM3 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Nkx2-4Q9EQM3 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Nkx2-4Q9EQM3 Gm12846-201ENSMUST00000120431 1373 ntBASIC14.57□□□□□ -0.08
Nkx2-4Q9EQM3 Taldo1-204ENSMUST00000211654 1362 ntTSL 5 BASIC14.57□□□□□ -0.08
Nkx2-4Q9EQM3 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Nkx2-4Q9EQM3 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Nkx2-4Q9EQM3 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Nkx2-4Q9EQM3 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Nkx2-4Q9EQM3 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Nkx2-4Q9EQM3 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Nkx2-4Q9EQM3 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Nkx2-4Q9EQM3 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Nkx2-4Q9EQM3 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Nkx2-4Q9EQM3 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
Nkx2-4Q9EQM3 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Nkx2-4Q9EQM3 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Nkx2-4Q9EQM3 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Nkx2-4Q9EQM3 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Nkx2-4Q9EQM3 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Nkx2-4Q9EQM3 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC14.56□□□□□ -0.08
Nkx2-4Q9EQM3 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Nkx2-4Q9EQM3 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC14.56□□□□□ -0.08
Nkx2-4Q9EQM3 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Nkx2-4Q9EQM3 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Nkx2-4Q9EQM3 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Nkx2-4Q9EQM3 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC14.56□□□□□ -0.08
Nkx2-4Q9EQM3 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC14.56□□□□□ -0.08
Nkx2-4Q9EQM3 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Nkx2-4Q9EQM3 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC14.56□□□□□ -0.08
Nkx2-4Q9EQM3 Rn7s1-201ENSMUST00000174924 300 ntBASIC14.56□□□□□ -0.08
Nkx2-4Q9EQM3 Rn7s2-201ENSMUST00000175032 300 ntBASIC14.56□□□□□ -0.08
Nkx2-4Q9EQM3 Gm26461-201ENSMUST00000175064 290 ntBASIC14.56□□□□□ -0.08
Nkx2-4Q9EQM3 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
Nkx2-4Q9EQM3 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC14.56□□□□□ -0.08
Nkx2-4Q9EQM3 Swi5-207ENSMUST00000183946 768 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Nkx2-4Q9EQM3 Ighv8-14-201ENSMUST00000196781 358 ntBASIC14.56□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 57.2 ms