Protein–RNA interactions for Protein: Q9EPU4

Cpsf1, Cleavage and polyadenylation specificity factor subunit 1, mousemouse

Known RBP Predictions only

Length 1,441 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf1Q9EPU4 Gm27772-201ENSMUST00000184900 187 ntBASIC19.53■□□□□ 0.72
Cpsf1Q9EPU4 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC19.53■□□□□ 0.72
Cpsf1Q9EPU4 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Cpsf1Q9EPU4 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
Cpsf1Q9EPU4 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Cpsf1Q9EPU4 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC19.53■□□□□ 0.72
Cpsf1Q9EPU4 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Cpsf1Q9EPU4 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
Cpsf1Q9EPU4 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
Cpsf1Q9EPU4 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Cpsf1Q9EPU4 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Cpsf1Q9EPU4 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Cpsf1Q9EPU4 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Cpsf1Q9EPU4 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Cpsf1Q9EPU4 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Cpsf1Q9EPU4 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Cpsf1Q9EPU4 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Cpsf1Q9EPU4 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC19.52■□□□□ 0.72
Cpsf1Q9EPU4 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC19.52■□□□□ 0.72
Cpsf1Q9EPU4 Mir698-201ENSMUST00000102164 109 ntBASIC19.52■□□□□ 0.72
Cpsf1Q9EPU4 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
Cpsf1Q9EPU4 Gm37748-201ENSMUST00000194379 1140 ntBASIC19.52■□□□□ 0.72
Cpsf1Q9EPU4 Gm43433-201ENSMUST00000196573 481 ntBASIC19.52■□□□□ 0.72
Cpsf1Q9EPU4 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC19.52■□□□□ 0.72
Cpsf1Q9EPU4 AC154687.2-201ENSMUST00000223853 640 ntBASIC19.52■□□□□ 0.72
Cpsf1Q9EPU4 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC19.52■□□□□ 0.72
Cpsf1Q9EPU4 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Cpsf1Q9EPU4 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
Cpsf1Q9EPU4 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Cpsf1Q9EPU4 Gm26513-201ENSMUST00000181802 2489 ntBASIC19.52■□□□□ 0.72
Cpsf1Q9EPU4 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Cpsf1Q9EPU4 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Cpsf1Q9EPU4 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Cpsf1Q9EPU4 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC19.52■□□□□ 0.72
Cpsf1Q9EPU4 Gm45760-201ENSMUST00000212190 1782 ntBASIC19.52■□□□□ 0.72
Cpsf1Q9EPU4 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
Cpsf1Q9EPU4 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
Cpsf1Q9EPU4 AC161252.3-201ENSMUST00000225465 1549 ntBASIC19.52■□□□□ 0.71
Cpsf1Q9EPU4 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Cpsf1Q9EPU4 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Cpsf1Q9EPU4 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
Cpsf1Q9EPU4 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Cpsf1Q9EPU4 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Cpsf1Q9EPU4 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Cpsf1Q9EPU4 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Cpsf1Q9EPU4 Gm11524-201ENSMUST00000119349 807 ntBASIC19.51■□□□□ 0.71
Cpsf1Q9EPU4 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Cpsf1Q9EPU4 Mir6392-201ENSMUST00000184924 108 ntBASIC19.51■□□□□ 0.71
Cpsf1Q9EPU4 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC19.51■□□□□ 0.71
Cpsf1Q9EPU4 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Cpsf1Q9EPU4 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Cpsf1Q9EPU4 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC19.51■□□□□ 0.71
Cpsf1Q9EPU4 AC155252.1-201ENSMUST00000226462 1208 ntBASIC19.51■□□□□ 0.71
Cpsf1Q9EPU4 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Cpsf1Q9EPU4 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Cpsf1Q9EPU4 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
Cpsf1Q9EPU4 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
Cpsf1Q9EPU4 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Cpsf1Q9EPU4 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
Cpsf1Q9EPU4 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
Cpsf1Q9EPU4 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Cpsf1Q9EPU4 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
Cpsf1Q9EPU4 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Cpsf1Q9EPU4 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Cpsf1Q9EPU4 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC19.51■□□□□ 0.71
Cpsf1Q9EPU4 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Cpsf1Q9EPU4 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Cpsf1Q9EPU4 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
Cpsf1Q9EPU4 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Cpsf1Q9EPU4 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Cpsf1Q9EPU4 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC19.51■□□□□ 0.71
Cpsf1Q9EPU4 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Cpsf1Q9EPU4 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC19.51■□□□□ 0.71
Cpsf1Q9EPU4 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Cpsf1Q9EPU4 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Cpsf1Q9EPU4 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Cpsf1Q9EPU4 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
Cpsf1Q9EPU4 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
Cpsf1Q9EPU4 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Cpsf1Q9EPU4 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
Cpsf1Q9EPU4 Gm37015-201ENSMUST00000192763 1521 ntBASIC19.5■□□□□ 0.71
Cpsf1Q9EPU4 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC19.5■□□□□ 0.71
Cpsf1Q9EPU4 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Cpsf1Q9EPU4 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Cpsf1Q9EPU4 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC19.5■□□□□ 0.71
Cpsf1Q9EPU4 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Cpsf1Q9EPU4 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Cpsf1Q9EPU4 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC19.5■□□□□ 0.71
Cpsf1Q9EPU4 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Cpsf1Q9EPU4 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Cpsf1Q9EPU4 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Cpsf1Q9EPU4 Zkscan14-203ENSMUST00000198959 2243 ntBASIC19.5■□□□□ 0.71
Cpsf1Q9EPU4 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Cpsf1Q9EPU4 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
Cpsf1Q9EPU4 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Cpsf1Q9EPU4 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Cpsf1Q9EPU4 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Cpsf1Q9EPU4 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Cpsf1Q9EPU4 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Cpsf1Q9EPU4 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 48.1 ms