Protein–RNA interactions for Protein: Q9D9Y8

Ssmem1, RIKEN cDNA 1700025E21, isoform CRA_b, mousemouse

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssmem1Q9D9Y8 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ssmem1Q9D9Y8 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ssmem1Q9D9Y8 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Ssmem1Q9D9Y8 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ssmem1Q9D9Y8 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ssmem1Q9D9Y8 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ssmem1Q9D9Y8 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Ssmem1Q9D9Y8 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Ssmem1Q9D9Y8 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ssmem1Q9D9Y8 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Ssmem1Q9D9Y8 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ssmem1Q9D9Y8 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ssmem1Q9D9Y8 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ssmem1Q9D9Y8 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ssmem1Q9D9Y8 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ssmem1Q9D9Y8 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ssmem1Q9D9Y8 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Ssmem1Q9D9Y8 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ssmem1Q9D9Y8 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC12.36□□□□□ -0.43
Ssmem1Q9D9Y8 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ssmem1Q9D9Y8 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ssmem1Q9D9Y8 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ssmem1Q9D9Y8 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Ssmem1Q9D9Y8 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Ssmem1Q9D9Y8 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Ssmem1Q9D9Y8 Gm16476-201ENSMUST00000221544 139 ntBASIC12.36□□□□□ -0.43
Ssmem1Q9D9Y8 Dupd1-202ENSMUST00000224735 548 ntBASIC12.36□□□□□ -0.43
Ssmem1Q9D9Y8 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ssmem1Q9D9Y8 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ssmem1Q9D9Y8 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ssmem1Q9D9Y8 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ssmem1Q9D9Y8 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ssmem1Q9D9Y8 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ssmem1Q9D9Y8 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Ssmem1Q9D9Y8 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ssmem1Q9D9Y8 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ssmem1Q9D9Y8 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ssmem1Q9D9Y8 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ssmem1Q9D9Y8 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ssmem1Q9D9Y8 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ssmem1Q9D9Y8 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ssmem1Q9D9Y8 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ssmem1Q9D9Y8 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Ssmem1Q9D9Y8 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Ssmem1Q9D9Y8 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Ssmem1Q9D9Y8 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ssmem1Q9D9Y8 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Ssmem1Q9D9Y8 Gm45751-201ENSMUST00000210185 1573 ntBASIC12.35□□□□□ -0.43
Ssmem1Q9D9Y8 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Ssmem1Q9D9Y8 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ssmem1Q9D9Y8 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Ssmem1Q9D9Y8 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ssmem1Q9D9Y8 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ssmem1Q9D9Y8 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ssmem1Q9D9Y8 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ssmem1Q9D9Y8 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Ssmem1Q9D9Y8 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ssmem1Q9D9Y8 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Ssmem1Q9D9Y8 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Ssmem1Q9D9Y8 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ssmem1Q9D9Y8 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Ssmem1Q9D9Y8 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Ssmem1Q9D9Y8 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ssmem1Q9D9Y8 Gm13223-201ENSMUST00000118609 747 ntBASIC12.35□□□□□ -0.43
Ssmem1Q9D9Y8 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Ssmem1Q9D9Y8 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
Ssmem1Q9D9Y8 Gm27680-201ENSMUST00000184192 160 ntBASIC12.35□□□□□ -0.43
Ssmem1Q9D9Y8 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC12.35□□□□□ -0.43
Ssmem1Q9D9Y8 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Ssmem1Q9D9Y8 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Ssmem1Q9D9Y8 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ssmem1Q9D9Y8 Mir125a-201ENSMUST00000083545 68 ntBASIC12.35□□□□□ -0.43
Ssmem1Q9D9Y8 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Ssmem1Q9D9Y8 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Ssmem1Q9D9Y8 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ssmem1Q9D9Y8 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ssmem1Q9D9Y8 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ssmem1Q9D9Y8 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Ssmem1Q9D9Y8 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Ssmem1Q9D9Y8 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ssmem1Q9D9Y8 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ssmem1Q9D9Y8 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ssmem1Q9D9Y8 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC12.35□□□□□ -0.43
Ssmem1Q9D9Y8 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ssmem1Q9D9Y8 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ssmem1Q9D9Y8 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ssmem1Q9D9Y8 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ssmem1Q9D9Y8 Fbxl12-205ENSMUST00000140702 1555 ntBASIC12.35□□□□□ -0.43
Ssmem1Q9D9Y8 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ssmem1Q9D9Y8 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC12.34□□□□□ -0.43
Ssmem1Q9D9Y8 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Ssmem1Q9D9Y8 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Ssmem1Q9D9Y8 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Ssmem1Q9D9Y8 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Ssmem1Q9D9Y8 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Ssmem1Q9D9Y8 Gm11960-202ENSMUST00000181063 2858 ntBASIC12.34□□□□□ -0.43
Ssmem1Q9D9Y8 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ssmem1Q9D9Y8 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ssmem1Q9D9Y8 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC12.34□□□□□ -0.43
Ssmem1Q9D9Y8 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms