Protein–RNA interactions for Protein: Q9D8D0

Tnfrsf13c, Tumor necrosis factor receptor superfamily member 13C, mousemouse

Predictions only

Length 175 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf13cQ9D8D0 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC11.18□□□□□ -0.62
Tnfrsf13cQ9D8D0 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Tnfrsf13cQ9D8D0 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Tnfrsf13cQ9D8D0 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC11.18□□□□□ -0.62
Tnfrsf13cQ9D8D0 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Tnfrsf13cQ9D8D0 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Tnfrsf13cQ9D8D0 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Tnfrsf13cQ9D8D0 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
Tnfrsf13cQ9D8D0 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Tnfrsf13cQ9D8D0 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC11.18□□□□□ -0.62
Tnfrsf13cQ9D8D0 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
Tnfrsf13cQ9D8D0 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Tnfrsf13cQ9D8D0 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
Tnfrsf13cQ9D8D0 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC11.17□□□□□ -0.62
Tnfrsf13cQ9D8D0 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Tnfrsf13cQ9D8D0 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Tnfrsf13cQ9D8D0 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
Tnfrsf13cQ9D8D0 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC11.17□□□□□ -0.62
Tnfrsf13cQ9D8D0 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Tnfrsf13cQ9D8D0 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Tnfrsf13cQ9D8D0 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Tnfrsf13cQ9D8D0 Kcnk16-202ENSMUST00000225596 2127 ntBASIC11.17□□□□□ -0.62
Tnfrsf13cQ9D8D0 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Tnfrsf13cQ9D8D0 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
Tnfrsf13cQ9D8D0 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Tnfrsf13cQ9D8D0 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Tnfrsf13cQ9D8D0 Gm11185-201ENSMUST00000117732 1007 ntBASIC11.17□□□□□ -0.62
Tnfrsf13cQ9D8D0 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
Tnfrsf13cQ9D8D0 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
Tnfrsf13cQ9D8D0 Gm17807-201ENSMUST00000186869 298 ntBASIC11.17□□□□□ -0.62
Tnfrsf13cQ9D8D0 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC11.17□□□□□ -0.62
Tnfrsf13cQ9D8D0 Gm37584-201ENSMUST00000193595 1290 ntBASIC11.17□□□□□ -0.62
Tnfrsf13cQ9D8D0 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Tnfrsf13cQ9D8D0 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC11.17□□□□□ -0.62
Tnfrsf13cQ9D8D0 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC11.17□□□□□ -0.62
Tnfrsf13cQ9D8D0 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Tnfrsf13cQ9D8D0 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Tnfrsf13cQ9D8D0 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Tnfrsf13cQ9D8D0 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC11.17□□□□□ -0.62
Tnfrsf13cQ9D8D0 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC11.17□□□□□ -0.62
Tnfrsf13cQ9D8D0 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Tnfrsf13cQ9D8D0 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
Tnfrsf13cQ9D8D0 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Tnfrsf13cQ9D8D0 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Tnfrsf13cQ9D8D0 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
Tnfrsf13cQ9D8D0 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Tnfrsf13cQ9D8D0 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Tnfrsf13cQ9D8D0 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Tnfrsf13cQ9D8D0 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Tnfrsf13cQ9D8D0 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
Tnfrsf13cQ9D8D0 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
Tnfrsf13cQ9D8D0 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
Tnfrsf13cQ9D8D0 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Tnfrsf13cQ9D8D0 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
Tnfrsf13cQ9D8D0 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Tnfrsf13cQ9D8D0 Gm11405-201ENSMUST00000118689 1556 ntBASIC11.16□□□□□ -0.62
Tnfrsf13cQ9D8D0 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Tnfrsf13cQ9D8D0 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Tnfrsf13cQ9D8D0 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC11.16□□□□□ -0.62
Tnfrsf13cQ9D8D0 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Tnfrsf13cQ9D8D0 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC11.16□□□□□ -0.62
Tnfrsf13cQ9D8D0 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
Tnfrsf13cQ9D8D0 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC11.16□□□□□ -0.62
Tnfrsf13cQ9D8D0 Gm5184-201ENSMUST00000220417 1702 ntBASIC11.16□□□□□ -0.62
Tnfrsf13cQ9D8D0 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Tnfrsf13cQ9D8D0 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
Tnfrsf13cQ9D8D0 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Tnfrsf13cQ9D8D0 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Tnfrsf13cQ9D8D0 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Tnfrsf13cQ9D8D0 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
Tnfrsf13cQ9D8D0 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC11.16□□□□□ -0.62
Tnfrsf13cQ9D8D0 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Tnfrsf13cQ9D8D0 Gm2308-201ENSMUST00000166539 1004 ntBASIC11.16□□□□□ -0.62
Tnfrsf13cQ9D8D0 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC11.16□□□□□ -0.62
Tnfrsf13cQ9D8D0 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Tnfrsf13cQ9D8D0 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Tnfrsf13cQ9D8D0 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC11.16□□□□□ -0.62
Tnfrsf13cQ9D8D0 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Tnfrsf13cQ9D8D0 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Tnfrsf13cQ9D8D0 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC11.16□□□□□ -0.62
Tnfrsf13cQ9D8D0 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Tnfrsf13cQ9D8D0 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Tnfrsf13cQ9D8D0 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Tnfrsf13cQ9D8D0 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Tnfrsf13cQ9D8D0 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC11.16□□□□□ -0.62
Tnfrsf13cQ9D8D0 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC11.16□□□□□ -0.62
Tnfrsf13cQ9D8D0 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Tnfrsf13cQ9D8D0 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Tnfrsf13cQ9D8D0 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
Tnfrsf13cQ9D8D0 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Tnfrsf13cQ9D8D0 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
Tnfrsf13cQ9D8D0 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Tnfrsf13cQ9D8D0 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC11.15□□□□□ -0.62
Tnfrsf13cQ9D8D0 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Tnfrsf13cQ9D8D0 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Tnfrsf13cQ9D8D0 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.62
Tnfrsf13cQ9D8D0 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.62
Tnfrsf13cQ9D8D0 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Tnfrsf13cQ9D8D0 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Tnfrsf13cQ9D8D0 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 36.1 ms