Protein–RNA interactions for Protein: Q9D7F7

Chmp4c, Charged multivesicular body protein 4c, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp4cQ9D7F7 Klk2-ps-201ENSMUST00000205342 571 ntBASIC17.12■□□□□ 0.33
Chmp4cQ9D7F7 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Chmp4cQ9D7F7 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC17.12■□□□□ 0.33
Chmp4cQ9D7F7 AC090659.1-201ENSMUST00000224334 768 ntBASIC17.12■□□□□ 0.33
Chmp4cQ9D7F7 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Chmp4cQ9D7F7 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Chmp4cQ9D7F7 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Chmp4cQ9D7F7 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Chmp4cQ9D7F7 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Chmp4cQ9D7F7 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Chmp4cQ9D7F7 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Chmp4cQ9D7F7 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Chmp4cQ9D7F7 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Chmp4cQ9D7F7 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Chmp4cQ9D7F7 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Chmp4cQ9D7F7 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Chmp4cQ9D7F7 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Chmp4cQ9D7F7 Gm37411-201ENSMUST00000194180 2282 ntBASIC17.12■□□□□ 0.33
Chmp4cQ9D7F7 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Chmp4cQ9D7F7 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Chmp4cQ9D7F7 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Chmp4cQ9D7F7 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Chmp4cQ9D7F7 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Chmp4cQ9D7F7 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Chmp4cQ9D7F7 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Chmp4cQ9D7F7 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Chmp4cQ9D7F7 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Chmp4cQ9D7F7 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Chmp4cQ9D7F7 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Chmp4cQ9D7F7 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC17.11■□□□□ 0.33
Chmp4cQ9D7F7 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC17.11■□□□□ 0.33
Chmp4cQ9D7F7 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
Chmp4cQ9D7F7 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Chmp4cQ9D7F7 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC17.11■□□□□ 0.33
Chmp4cQ9D7F7 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Chmp4cQ9D7F7 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Chmp4cQ9D7F7 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Chmp4cQ9D7F7 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Chmp4cQ9D7F7 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Chmp4cQ9D7F7 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Chmp4cQ9D7F7 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Chmp4cQ9D7F7 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Chmp4cQ9D7F7 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC17.11■□□□□ 0.33
Chmp4cQ9D7F7 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Chmp4cQ9D7F7 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Chmp4cQ9D7F7 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Chmp4cQ9D7F7 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Chmp4cQ9D7F7 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Chmp4cQ9D7F7 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Chmp4cQ9D7F7 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC17.1■□□□□ 0.33
Chmp4cQ9D7F7 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Chmp4cQ9D7F7 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Chmp4cQ9D7F7 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Chmp4cQ9D7F7 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Chmp4cQ9D7F7 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Chmp4cQ9D7F7 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC17.1■□□□□ 0.33
Chmp4cQ9D7F7 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Chmp4cQ9D7F7 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Chmp4cQ9D7F7 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Chmp4cQ9D7F7 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC17.1■□□□□ 0.33
Chmp4cQ9D7F7 Gm2272-201ENSMUST00000194903 582 ntBASIC17.1■□□□□ 0.33
Chmp4cQ9D7F7 Olfr286-202ENSMUST00000205305 969 ntBASIC17.1■□□□□ 0.33
Chmp4cQ9D7F7 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC17.1■□□□□ 0.33
Chmp4cQ9D7F7 CT025555.1-201ENSMUST00000225901 1217 ntBASIC17.1■□□□□ 0.33
Chmp4cQ9D7F7 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC17.1■□□□□ 0.33
Chmp4cQ9D7F7 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Chmp4cQ9D7F7 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Chmp4cQ9D7F7 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
Chmp4cQ9D7F7 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Chmp4cQ9D7F7 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Chmp4cQ9D7F7 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Chmp4cQ9D7F7 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Chmp4cQ9D7F7 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Chmp4cQ9D7F7 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Chmp4cQ9D7F7 CT025610.1-201ENSMUST00000224552 1786 ntBASIC17.1■□□□□ 0.33
Chmp4cQ9D7F7 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Chmp4cQ9D7F7 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Chmp4cQ9D7F7 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Chmp4cQ9D7F7 Pcgf5-211ENSMUST00000225920 6443 ntBASIC17.09■□□□□ 0.33
Chmp4cQ9D7F7 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Chmp4cQ9D7F7 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Chmp4cQ9D7F7 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Chmp4cQ9D7F7 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Chmp4cQ9D7F7 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC17.09■□□□□ 0.33
Chmp4cQ9D7F7 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC17.09■□□□□ 0.33
Chmp4cQ9D7F7 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Chmp4cQ9D7F7 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Chmp4cQ9D7F7 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Chmp4cQ9D7F7 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Chmp4cQ9D7F7 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Chmp4cQ9D7F7 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Chmp4cQ9D7F7 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Chmp4cQ9D7F7 AC174742.1-201ENSMUST00000218272 304 ntBASIC17.09■□□□□ 0.33
Chmp4cQ9D7F7 AC131187.1-201ENSMUST00000224567 809 ntBASIC17.09■□□□□ 0.33
Chmp4cQ9D7F7 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Chmp4cQ9D7F7 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Chmp4cQ9D7F7 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Chmp4cQ9D7F7 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Chmp4cQ9D7F7 AC131586.3-201ENSMUST00000228355 1367 ntBASIC17.09■□□□□ 0.33
Chmp4cQ9D7F7 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 50.4 ms