Protein–RNA interactions for Protein: Q9D554

Sf3a3, Splicing factor 3A subunit 3, mousemouse

Known RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a3Q9D554 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC14.51□□□□□ -0.09
Sf3a3Q9D554 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC14.51□□□□□ -0.09
Sf3a3Q9D554 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC14.51□□□□□ -0.09
Sf3a3Q9D554 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Sf3a3Q9D554 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC14.51□□□□□ -0.09
Sf3a3Q9D554 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Sf3a3Q9D554 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Sf3a3Q9D554 Olfr129-201ENSMUST00000122318 993 ntBASIC14.51□□□□□ -0.09
Sf3a3Q9D554 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
Sf3a3Q9D554 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Sf3a3Q9D554 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC14.51□□□□□ -0.09
Sf3a3Q9D554 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC14.51□□□□□ -0.09
Sf3a3Q9D554 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Sf3a3Q9D554 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Sf3a3Q9D554 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Sf3a3Q9D554 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Sf3a3Q9D554 Ncan-201ENSMUST00000002412 7195 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Sf3a3Q9D554 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Sf3a3Q9D554 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC14.51□□□□□ -0.09
Sf3a3Q9D554 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Sf3a3Q9D554 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Sf3a3Q9D554 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Sf3a3Q9D554 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Sf3a3Q9D554 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Sf3a3Q9D554 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Sf3a3Q9D554 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Sf3a3Q9D554 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Sf3a3Q9D554 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Sf3a3Q9D554 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Sf3a3Q9D554 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC14.5□□□□□ -0.09
Sf3a3Q9D554 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Sf3a3Q9D554 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Sf3a3Q9D554 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Sf3a3Q9D554 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Sf3a3Q9D554 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC14.5□□□□□ -0.09
Sf3a3Q9D554 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC14.5□□□□□ -0.09
Sf3a3Q9D554 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC14.5□□□□□ -0.09
Sf3a3Q9D554 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Sf3a3Q9D554 Gm11453-201ENSMUST00000117318 1007 ntBASIC14.5□□□□□ -0.09
Sf3a3Q9D554 Gm15358-201ENSMUST00000119249 520 ntBASIC14.5□□□□□ -0.09
Sf3a3Q9D554 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Sf3a3Q9D554 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC14.5□□□□□ -0.09
Sf3a3Q9D554 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Sf3a3Q9D554 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Sf3a3Q9D554 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Sf3a3Q9D554 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Sf3a3Q9D554 Gm12626-201ENSMUST00000117339 1983 ntBASIC14.5□□□□□ -0.09
Sf3a3Q9D554 Gm12623-201ENSMUST00000119849 1983 ntBASIC14.5□□□□□ -0.09
Sf3a3Q9D554 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC14.5□□□□□ -0.09
Sf3a3Q9D554 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Sf3a3Q9D554 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Sf3a3Q9D554 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Sf3a3Q9D554 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Sf3a3Q9D554 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Sf3a3Q9D554 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Sf3a3Q9D554 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC14.5□□□□□ -0.09
Sf3a3Q9D554 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Sf3a3Q9D554 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
Sf3a3Q9D554 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Sf3a3Q9D554 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Sf3a3Q9D554 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Sf3a3Q9D554 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC14.49□□□□□ -0.09
Sf3a3Q9D554 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Sf3a3Q9D554 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Sf3a3Q9D554 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Sf3a3Q9D554 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Sf3a3Q9D554 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Sf3a3Q9D554 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC14.49□□□□□ -0.09
Sf3a3Q9D554 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Sf3a3Q9D554 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Sf3a3Q9D554 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Sf3a3Q9D554 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC14.49□□□□□ -0.09
Sf3a3Q9D554 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC14.49□□□□□ -0.09
Sf3a3Q9D554 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC14.49□□□□□ -0.09
Sf3a3Q9D554 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
Sf3a3Q9D554 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC14.49□□□□□ -0.09
Sf3a3Q9D554 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC14.49□□□□□ -0.09
Sf3a3Q9D554 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Sf3a3Q9D554 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Sf3a3Q9D554 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Sf3a3Q9D554 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Sf3a3Q9D554 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
Sf3a3Q9D554 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Sf3a3Q9D554 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
Sf3a3Q9D554 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Sf3a3Q9D554 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
Sf3a3Q9D554 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
Sf3a3Q9D554 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC14.49□□□□□ -0.09
Sf3a3Q9D554 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Sf3a3Q9D554 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Sf3a3Q9D554 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Sf3a3Q9D554 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
Sf3a3Q9D554 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC14.49□□□□□ -0.09
Sf3a3Q9D554 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Sf3a3Q9D554 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Sf3a3Q9D554 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
Sf3a3Q9D554 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
Sf3a3Q9D554 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC14.48□□□□□ -0.09
Sf3a3Q9D554 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Sf3a3Q9D554 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 24.1 ms