Protein–RNA interactions for Protein: Q9D3E6

Stag1, Cohesin subunit SA-1, mousemouse

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Stag1Q9D3E6 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC17■□□□□ 0.31
Stag1Q9D3E6 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
Stag1Q9D3E6 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
Stag1Q9D3E6 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Stag1Q9D3E6 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Stag1Q9D3E6 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Stag1Q9D3E6 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
Stag1Q9D3E6 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC17■□□□□ 0.31
Stag1Q9D3E6 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Stag1Q9D3E6 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC17■□□□□ 0.31
Stag1Q9D3E6 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC17■□□□□ 0.31
Stag1Q9D3E6 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
Stag1Q9D3E6 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC17■□□□□ 0.31
Stag1Q9D3E6 Mir6392-201ENSMUST00000184924 108 ntBASIC17■□□□□ 0.31
Stag1Q9D3E6 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC17■□□□□ 0.31
Stag1Q9D3E6 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC17■□□□□ 0.31
Stag1Q9D3E6 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Stag1Q9D3E6 Gm18187-201ENSMUST00000196476 984 ntBASIC17■□□□□ 0.31
Stag1Q9D3E6 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Stag1Q9D3E6 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC17■□□□□ 0.31
Stag1Q9D3E6 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
Stag1Q9D3E6 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
Stag1Q9D3E6 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Stag1Q9D3E6 Gm14451-201ENSMUST00000121581 1542 ntBASIC17■□□□□ 0.31
Stag1Q9D3E6 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Stag1Q9D3E6 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Stag1Q9D3E6 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Stag1Q9D3E6 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC17■□□□□ 0.31
Stag1Q9D3E6 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC17■□□□□ 0.31
Stag1Q9D3E6 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Stag1Q9D3E6 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Stag1Q9D3E6 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Stag1Q9D3E6 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Stag1Q9D3E6 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Stag1Q9D3E6 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Stag1Q9D3E6 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
Stag1Q9D3E6 Fbxl12-205ENSMUST00000140702 1555 ntBASIC16.99■□□□□ 0.31
Stag1Q9D3E6 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Stag1Q9D3E6 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Stag1Q9D3E6 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Stag1Q9D3E6 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Stag1Q9D3E6 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Stag1Q9D3E6 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Stag1Q9D3E6 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Stag1Q9D3E6 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Stag1Q9D3E6 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Stag1Q9D3E6 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Stag1Q9D3E6 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Stag1Q9D3E6 AC166574.6-201ENSMUST00000227889 1806 ntBASIC16.99■□□□□ 0.31
Stag1Q9D3E6 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC16.99■□□□□ 0.31
Stag1Q9D3E6 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC16.99■□□□□ 0.31
Stag1Q9D3E6 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC16.99■□□□□ 0.31
Stag1Q9D3E6 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Stag1Q9D3E6 Gm21470-201ENSMUST00000187680 696 ntBASIC16.99■□□□□ 0.31
Stag1Q9D3E6 AC130829.1-201ENSMUST00000221548 494 ntBASIC16.99■□□□□ 0.31
Stag1Q9D3E6 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Stag1Q9D3E6 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC16.99■□□□□ 0.31
Stag1Q9D3E6 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Stag1Q9D3E6 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Stag1Q9D3E6 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Stag1Q9D3E6 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Stag1Q9D3E6 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Stag1Q9D3E6 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Stag1Q9D3E6 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Stag1Q9D3E6 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Stag1Q9D3E6 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Stag1Q9D3E6 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Stag1Q9D3E6 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
Stag1Q9D3E6 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
Stag1Q9D3E6 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
Stag1Q9D3E6 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
Stag1Q9D3E6 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC16.98■□□□□ 0.31
Stag1Q9D3E6 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC16.98■□□□□ 0.31
Stag1Q9D3E6 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
Stag1Q9D3E6 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
Stag1Q9D3E6 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC16.98■□□□□ 0.31
Stag1Q9D3E6 Gm14127-201ENSMUST00000117906 678 ntBASIC16.98■□□□□ 0.31
Stag1Q9D3E6 Ldha-ps-201ENSMUST00000119390 995 ntBASIC16.98■□□□□ 0.31
Stag1Q9D3E6 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
Stag1Q9D3E6 Gm45059-201ENSMUST00000205558 1077 ntBASIC16.98■□□□□ 0.31
Stag1Q9D3E6 Gm19220-201ENSMUST00000222682 803 ntBASIC16.98■□□□□ 0.31
Stag1Q9D3E6 Gm37912-201ENSMUST00000191895 3076 ntBASIC16.98■□□□□ 0.31
Stag1Q9D3E6 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Stag1Q9D3E6 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Stag1Q9D3E6 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Stag1Q9D3E6 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Stag1Q9D3E6 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC16.98■□□□□ 0.31
Stag1Q9D3E6 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC16.98■□□□□ 0.31
Stag1Q9D3E6 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC16.97■□□□□ 0.31
Stag1Q9D3E6 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
Stag1Q9D3E6 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
Stag1Q9D3E6 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Stag1Q9D3E6 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Stag1Q9D3E6 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC16.97■□□□□ 0.31
Stag1Q9D3E6 Gm11478-201ENSMUST00000117851 599 ntBASIC16.97■□□□□ 0.31
Stag1Q9D3E6 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Stag1Q9D3E6 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Stag1Q9D3E6 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC16.97■□□□□ 0.31
Stag1Q9D3E6 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Stag1Q9D3E6 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 67.6 ms