Protein–RNA interactions for Protein: Q9D2H5

Trim42, Tripartite motif-containing protein 42, mousemouse

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim42Q9D2H5 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trim42Q9D2H5 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trim42Q9D2H5 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC14.32□□□□□ -0.12
Trim42Q9D2H5 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trim42Q9D2H5 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Trim42Q9D2H5 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trim42Q9D2H5 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trim42Q9D2H5 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Trim42Q9D2H5 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Trim42Q9D2H5 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trim42Q9D2H5 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trim42Q9D2H5 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trim42Q9D2H5 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trim42Q9D2H5 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trim42Q9D2H5 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trim42Q9D2H5 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Trim42Q9D2H5 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Trim42Q9D2H5 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC14.32□□□□□ -0.12
Trim42Q9D2H5 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trim42Q9D2H5 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trim42Q9D2H5 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trim42Q9D2H5 Gm29019-202ENSMUST00000188623 564 ntTSL 2 BASIC14.32□□□□□ -0.12
Trim42Q9D2H5 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC14.32□□□□□ -0.12
Trim42Q9D2H5 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Trim42Q9D2H5 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC14.32□□□□□ -0.12
Trim42Q9D2H5 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Trim42Q9D2H5 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC14.32□□□□□ -0.12
Trim42Q9D2H5 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trim42Q9D2H5 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trim42Q9D2H5 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC14.32□□□□□ -0.12
Trim42Q9D2H5 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trim42Q9D2H5 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trim42Q9D2H5 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trim42Q9D2H5 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC14.32□□□□□ -0.12
Trim42Q9D2H5 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trim42Q9D2H5 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Trim42Q9D2H5 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trim42Q9D2H5 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Trim42Q9D2H5 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trim42Q9D2H5 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trim42Q9D2H5 Gypa-201ENSMUST00000063359 1848 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trim42Q9D2H5 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Trim42Q9D2H5 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trim42Q9D2H5 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trim42Q9D2H5 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trim42Q9D2H5 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trim42Q9D2H5 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trim42Q9D2H5 Gm14042-201ENSMUST00000120139 833 ntBASIC14.31□□□□□ -0.12
Trim42Q9D2H5 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Trim42Q9D2H5 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trim42Q9D2H5 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC14.31□□□□□ -0.12
Trim42Q9D2H5 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Trim42Q9D2H5 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC14.31□□□□□ -0.12
Trim42Q9D2H5 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Trim42Q9D2H5 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Trim42Q9D2H5 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trim42Q9D2H5 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Trim42Q9D2H5 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Trim42Q9D2H5 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Trim42Q9D2H5 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trim42Q9D2H5 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Trim42Q9D2H5 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC14.31□□□□□ -0.12
Trim42Q9D2H5 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Trim42Q9D2H5 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trim42Q9D2H5 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trim42Q9D2H5 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trim42Q9D2H5 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Trim42Q9D2H5 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
Trim42Q9D2H5 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trim42Q9D2H5 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Trim42Q9D2H5 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC14.31□□□□□ -0.12
Trim42Q9D2H5 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trim42Q9D2H5 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Trim42Q9D2H5 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trim42Q9D2H5 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trim42Q9D2H5 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Trim42Q9D2H5 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trim42Q9D2H5 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC14.3□□□□□ -0.12
Trim42Q9D2H5 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trim42Q9D2H5 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trim42Q9D2H5 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trim42Q9D2H5 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC14.3□□□□□ -0.12
Trim42Q9D2H5 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Trim42Q9D2H5 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trim42Q9D2H5 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trim42Q9D2H5 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Trim42Q9D2H5 Gm8749-201ENSMUST00000117737 331 ntBASIC14.3□□□□□ -0.12
Trim42Q9D2H5 Gm15593-201ENSMUST00000122085 1008 ntBASIC14.3□□□□□ -0.12
Trim42Q9D2H5 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Trim42Q9D2H5 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC14.3□□□□□ -0.12
Trim42Q9D2H5 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC14.3□□□□□ -0.12
Trim42Q9D2H5 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Trim42Q9D2H5 AC124569.2-201ENSMUST00000225998 818 ntBASIC14.3□□□□□ -0.12
Trim42Q9D2H5 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC14.3□□□□□ -0.12
Trim42Q9D2H5 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trim42Q9D2H5 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trim42Q9D2H5 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trim42Q9D2H5 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trim42Q9D2H5 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Trim42Q9D2H5 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 56.3 ms