Protein–RNA interactions for Protein: Q9CZN7

Shmt2, Serine hydroxymethyltransferase, mousemouse

Known RBP Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt2Q9CZN7 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC13.69□□□□□ -0.22
Shmt2Q9CZN7 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Shmt2Q9CZN7 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Shmt2Q9CZN7 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Shmt2Q9CZN7 Gm2420-202ENSMUST00000202224 2249 ntBASIC13.69□□□□□ -0.22
Shmt2Q9CZN7 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Shmt2Q9CZN7 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Shmt2Q9CZN7 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Shmt2Q9CZN7 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Shmt2Q9CZN7 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Shmt2Q9CZN7 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC13.69□□□□□ -0.22
Shmt2Q9CZN7 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC13.69□□□□□ -0.22
Shmt2Q9CZN7 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Shmt2Q9CZN7 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC13.69□□□□□ -0.22
Shmt2Q9CZN7 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Shmt2Q9CZN7 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Shmt2Q9CZN7 Gm42769-201ENSMUST00000198576 1659 ntBASIC13.69□□□□□ -0.22
Shmt2Q9CZN7 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Shmt2Q9CZN7 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Shmt2Q9CZN7 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Shmt2Q9CZN7 Ntrk2-208ENSMUST00000225583 2719 ntBASIC13.69□□□□□ -0.22
Shmt2Q9CZN7 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Shmt2Q9CZN7 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Shmt2Q9CZN7 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Shmt2Q9CZN7 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Shmt2Q9CZN7 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Shmt2Q9CZN7 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Shmt2Q9CZN7 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Shmt2Q9CZN7 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Shmt2Q9CZN7 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Shmt2Q9CZN7 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Shmt2Q9CZN7 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Shmt2Q9CZN7 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Shmt2Q9CZN7 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC13.68□□□□□ -0.22
Shmt2Q9CZN7 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Shmt2Q9CZN7 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Shmt2Q9CZN7 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Shmt2Q9CZN7 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Shmt2Q9CZN7 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Shmt2Q9CZN7 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Shmt2Q9CZN7 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Shmt2Q9CZN7 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
Shmt2Q9CZN7 Gm4995-201ENSMUST00000117247 432 ntBASIC13.68□□□□□ -0.22
Shmt2Q9CZN7 Gm6226-201ENSMUST00000117765 1146 ntBASIC13.68□□□□□ -0.22
Shmt2Q9CZN7 Gm11025-201ENSMUST00000140773 466 ntBASIC13.68□□□□□ -0.22
Shmt2Q9CZN7 Gm6736-201ENSMUST00000166583 948 ntBASIC13.68□□□□□ -0.22
Shmt2Q9CZN7 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC13.68□□□□□ -0.22
Shmt2Q9CZN7 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Shmt2Q9CZN7 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Shmt2Q9CZN7 Gm45612-201ENSMUST00000211320 160 ntBASIC13.68□□□□□ -0.22
Shmt2Q9CZN7 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC13.68□□□□□ -0.22
Shmt2Q9CZN7 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC13.68□□□□□ -0.22
Shmt2Q9CZN7 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC13.68□□□□□ -0.22
Shmt2Q9CZN7 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC13.68□□□□□ -0.22
Shmt2Q9CZN7 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Shmt2Q9CZN7 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Shmt2Q9CZN7 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Shmt2Q9CZN7 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Shmt2Q9CZN7 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Shmt2Q9CZN7 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC13.68□□□□□ -0.22
Shmt2Q9CZN7 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Shmt2Q9CZN7 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Shmt2Q9CZN7 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Shmt2Q9CZN7 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Shmt2Q9CZN7 AC131743.5-201ENSMUST00000220775 1618 ntBASIC13.68□□□□□ -0.22
Shmt2Q9CZN7 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Shmt2Q9CZN7 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Shmt2Q9CZN7 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Shmt2Q9CZN7 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Shmt2Q9CZN7 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Shmt2Q9CZN7 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Shmt2Q9CZN7 Gm43364-201ENSMUST00000196046 3274 ntBASIC13.67□□□□□ -0.22
Shmt2Q9CZN7 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Shmt2Q9CZN7 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Shmt2Q9CZN7 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Shmt2Q9CZN7 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
Shmt2Q9CZN7 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Shmt2Q9CZN7 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Shmt2Q9CZN7 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Shmt2Q9CZN7 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Shmt2Q9CZN7 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Shmt2Q9CZN7 Gm14822-201ENSMUST00000122247 291 ntBASIC13.67□□□□□ -0.22
Shmt2Q9CZN7 Rpph1-201ENSMUST00000175096 319 ntBASIC13.67□□□□□ -0.22
Shmt2Q9CZN7 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC13.67□□□□□ -0.22
Shmt2Q9CZN7 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Shmt2Q9CZN7 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Shmt2Q9CZN7 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Shmt2Q9CZN7 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Shmt2Q9CZN7 AC126250.1-201ENSMUST00000228343 1768 ntBASIC13.67□□□□□ -0.22
Shmt2Q9CZN7 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Shmt2Q9CZN7 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Shmt2Q9CZN7 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Shmt2Q9CZN7 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Shmt2Q9CZN7 Gm45003-201ENSMUST00000205875 2158 ntBASIC13.66□□□□□ -0.22
Shmt2Q9CZN7 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Shmt2Q9CZN7 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Shmt2Q9CZN7 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Shmt2Q9CZN7 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Shmt2Q9CZN7 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Shmt2Q9CZN7 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 54.2 ms