Protein–RNA interactions for Protein: Q9CQV4

Retreg3, Reticulophagy regulator 3, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Retreg3Q9CQV4 Gm44785-201ENSMUST00000207379 620 ntTSL 5 BASIC14.5□□□□□ -0.09
Retreg3Q9CQV4 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Retreg3Q9CQV4 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC14.5□□□□□ -0.09
Retreg3Q9CQV4 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Retreg3Q9CQV4 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Retreg3Q9CQV4 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
Retreg3Q9CQV4 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Retreg3Q9CQV4 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC14.5□□□□□ -0.09
Retreg3Q9CQV4 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC14.5□□□□□ -0.09
Retreg3Q9CQV4 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Retreg3Q9CQV4 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Retreg3Q9CQV4 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Retreg3Q9CQV4 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Retreg3Q9CQV4 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Retreg3Q9CQV4 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Retreg3Q9CQV4 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC14.49□□□□□ -0.09
Retreg3Q9CQV4 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Retreg3Q9CQV4 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Retreg3Q9CQV4 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Retreg3Q9CQV4 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Retreg3Q9CQV4 Gm22065-201ENSMUST00000103753 110 ntBASIC14.49□□□□□ -0.09
Retreg3Q9CQV4 Gm22066-201ENSMUST00000103761 110 ntBASIC14.49□□□□□ -0.09
Retreg3Q9CQV4 Gm24932-201ENSMUST00000103763 110 ntBASIC14.49□□□□□ -0.09
Retreg3Q9CQV4 Gm24115-201ENSMUST00000103799 110 ntBASIC14.49□□□□□ -0.09
Retreg3Q9CQV4 Gm22190-201ENSMUST00000103827 110 ntBASIC14.49□□□□□ -0.09
Retreg3Q9CQV4 Gm22191-201ENSMUST00000103831 110 ntBASIC14.49□□□□□ -0.09
Retreg3Q9CQV4 Gm25287-201ENSMUST00000103846 110 ntBASIC14.49□□□□□ -0.09
Retreg3Q9CQV4 Gm24721-201ENSMUST00000103849 110 ntBASIC14.49□□□□□ -0.09
Retreg3Q9CQV4 Gm22918-201ENSMUST00000103855 110 ntBASIC14.49□□□□□ -0.09
Retreg3Q9CQV4 Gm28018-201ENSMUST00000103869 110 ntBASIC14.49□□□□□ -0.09
Retreg3Q9CQV4 Gm26399-201ENSMUST00000103937 110 ntBASIC14.49□□□□□ -0.09
Retreg3Q9CQV4 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
Retreg3Q9CQV4 Gm14042-201ENSMUST00000120139 833 ntBASIC14.49□□□□□ -0.09
Retreg3Q9CQV4 Rpa3-201ENSMUST00000012627 670 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Retreg3Q9CQV4 Speer4f2-201ENSMUST00000166086 1278 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
Retreg3Q9CQV4 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
Retreg3Q9CQV4 Gm10275-202ENSMUST00000168697 495 ntBASIC14.49□□□□□ -0.09
Retreg3Q9CQV4 Gm25349-201ENSMUST00000177728 110 ntBASIC14.49□□□□□ -0.09
Retreg3Q9CQV4 Gm23616-201ENSMUST00000177797 110 ntBASIC14.49□□□□□ -0.09
Retreg3Q9CQV4 Gm25871-201ENSMUST00000177816 110 ntBASIC14.49□□□□□ -0.09
Retreg3Q9CQV4 Gm24752-201ENSMUST00000178240 110 ntBASIC14.49□□□□□ -0.09
Retreg3Q9CQV4 Gm24496-201ENSMUST00000178287 110 ntBASIC14.49□□□□□ -0.09
Retreg3Q9CQV4 Gm25649-201ENSMUST00000178476 110 ntBASIC14.49□□□□□ -0.09
Retreg3Q9CQV4 Gm25548-201ENSMUST00000178681 110 ntBASIC14.49□□□□□ -0.09
Retreg3Q9CQV4 Gm23147-201ENSMUST00000178841 110 ntBASIC14.49□□□□□ -0.09
Retreg3Q9CQV4 Gm26095-201ENSMUST00000179270 110 ntBASIC14.49□□□□□ -0.09
Retreg3Q9CQV4 Gm22171-201ENSMUST00000179283 110 ntBASIC14.49□□□□□ -0.09
Retreg3Q9CQV4 Gm23936-201ENSMUST00000179354 110 ntBASIC14.49□□□□□ -0.09
Retreg3Q9CQV4 Gm22619-201ENSMUST00000179516 110 ntBASIC14.49□□□□□ -0.09
Retreg3Q9CQV4 Gm25255-201ENSMUST00000179579 110 ntBASIC14.49□□□□□ -0.09
Retreg3Q9CQV4 Gm24755-201ENSMUST00000179691 110 ntBASIC14.49□□□□□ -0.09
Retreg3Q9CQV4 Gm26506-201ENSMUST00000179692 110 ntBASIC14.49□□□□□ -0.09
Retreg3Q9CQV4 Gm25086-201ENSMUST00000179931 110 ntBASIC14.49□□□□□ -0.09
Retreg3Q9CQV4 Gm23243-201ENSMUST00000180047 110 ntBASIC14.49□□□□□ -0.09
Retreg3Q9CQV4 Gm24659-201ENSMUST00000180212 110 ntBASIC14.49□□□□□ -0.09
Retreg3Q9CQV4 Gm24169-201ENSMUST00000180244 110 ntBASIC14.49□□□□□ -0.09
Retreg3Q9CQV4 Gm23689-201ENSMUST00000180354 110 ntBASIC14.49□□□□□ -0.09
Retreg3Q9CQV4 Gm27359-201ENSMUST00000184153 110 ntBASIC14.49□□□□□ -0.09
Retreg3Q9CQV4 Gm27785-201ENSMUST00000184268 110 ntBASIC14.49□□□□□ -0.09
Retreg3Q9CQV4 Gm27466-201ENSMUST00000184396 110 ntBASIC14.49□□□□□ -0.09
Retreg3Q9CQV4 Gm27703-201ENSMUST00000184836 110 ntBASIC14.49□□□□□ -0.09
Retreg3Q9CQV4 Gm20822-202ENSMUST00000188422 1229 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Retreg3Q9CQV4 Gm20828-202ENSMUST00000190516 1229 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Retreg3Q9CQV4 1700066B17Rik-203ENSMUST00000191299 536 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Retreg3Q9CQV4 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Retreg3Q9CQV4 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Retreg3Q9CQV4 AC155729.1-201ENSMUST00000227758 544 ntBASIC14.49□□□□□ -0.09
Retreg3Q9CQV4 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Retreg3Q9CQV4 Gm10275-201ENSMUST00000092620 635 ntBASIC14.49□□□□□ -0.09
Retreg3Q9CQV4 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Retreg3Q9CQV4 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Retreg3Q9CQV4 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Retreg3Q9CQV4 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Retreg3Q9CQV4 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
Retreg3Q9CQV4 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Retreg3Q9CQV4 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Retreg3Q9CQV4 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC14.49□□□□□ -0.09
Retreg3Q9CQV4 Gm43205-201ENSMUST00000198622 1968 ntBASIC14.49□□□□□ -0.09
Retreg3Q9CQV4 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Retreg3Q9CQV4 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Retreg3Q9CQV4 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
Retreg3Q9CQV4 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Retreg3Q9CQV4 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Retreg3Q9CQV4 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Retreg3Q9CQV4 Gm13127-201ENSMUST00000118978 1389 ntBASIC14.48□□□□□ -0.09
Retreg3Q9CQV4 0610040B10Rik-203ENSMUST00000198455 1643 ntBASIC14.48□□□□□ -0.09
Retreg3Q9CQV4 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
Retreg3Q9CQV4 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
Retreg3Q9CQV4 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Retreg3Q9CQV4 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Retreg3Q9CQV4 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Retreg3Q9CQV4 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Retreg3Q9CQV4 Sorbs3-204ENSMUST00000227929 2460 ntBASIC14.48□□□□□ -0.09
Retreg3Q9CQV4 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Retreg3Q9CQV4 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Retreg3Q9CQV4 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC14.48□□□□□ -0.09
Retreg3Q9CQV4 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Retreg3Q9CQV4 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
Retreg3Q9CQV4 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Retreg3Q9CQV4 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 37.6 ms