Protein–RNA interactions for Protein: Q9CQD0

Rpl39l, RIKEN cDNA 4930517K11, mousemouse

Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl39lQ9CQD0 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Rpl39lQ9CQD0 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Rpl39lQ9CQD0 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Rpl39lQ9CQD0 Pcdhb22-202ENSMUST00000192409 6609 ntAPPRIS P1 BASIC9.31□□□□□ -0.92
Rpl39lQ9CQD0 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Rpl39lQ9CQD0 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Rpl39lQ9CQD0 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Rpl39lQ9CQD0 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Rpl39lQ9CQD0 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Rpl39lQ9CQD0 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Rpl39lQ9CQD0 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Rpl39lQ9CQD0 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Rpl39lQ9CQD0 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Rpl39lQ9CQD0 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC9.31□□□□□ -0.92
Rpl39lQ9CQD0 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC9.3□□□□□ -0.92
Rpl39lQ9CQD0 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC9.3□□□□□ -0.92
Rpl39lQ9CQD0 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Rpl39lQ9CQD0 Gm37644-201ENSMUST00000192190 2270 ntBASIC9.3□□□□□ -0.92
Rpl39lQ9CQD0 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Rpl39lQ9CQD0 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Rpl39lQ9CQD0 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC9.3□□□□□ -0.92
Rpl39lQ9CQD0 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
Rpl39lQ9CQD0 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC9.3□□□□□ -0.92
Rpl39lQ9CQD0 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Rpl39lQ9CQD0 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
Rpl39lQ9CQD0 Palld-204ENSMUST00000121785 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC9.3□□□□□ -0.92
Rpl39lQ9CQD0 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Rpl39lQ9CQD0 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Rpl39lQ9CQD0 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Rpl39lQ9CQD0 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC9.3□□□□□ -0.92
Rpl39lQ9CQD0 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC9.3□□□□□ -0.92
Rpl39lQ9CQD0 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC9.3□□□□□ -0.92
Rpl39lQ9CQD0 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC9.3□□□□□ -0.92
Rpl39lQ9CQD0 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC9.3□□□□□ -0.92
Rpl39lQ9CQD0 Gm6623-201ENSMUST00000173570 544 ntBASIC9.3□□□□□ -0.92
Rpl39lQ9CQD0 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC9.3□□□□□ -0.92
Rpl39lQ9CQD0 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC9.3□□□□□ -0.92
Rpl39lQ9CQD0 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC9.3□□□□□ -0.92
Rpl39lQ9CQD0 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Rpl39lQ9CQD0 AC134329.2-201ENSMUST00000217897 428 ntBASIC9.3□□□□□ -0.92
Rpl39lQ9CQD0 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC9.3□□□□□ -0.92
Rpl39lQ9CQD0 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC9.3□□□□□ -0.92
Rpl39lQ9CQD0 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Rpl39lQ9CQD0 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Rpl39lQ9CQD0 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Rpl39lQ9CQD0 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC9.3□□□□□ -0.92
Rpl39lQ9CQD0 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Rpl39lQ9CQD0 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Rpl39lQ9CQD0 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
Rpl39lQ9CQD0 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC9.3□□□□□ -0.92
Rpl39lQ9CQD0 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Rpl39lQ9CQD0 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Rpl39lQ9CQD0 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC9.3□□□□□ -0.92
Rpl39lQ9CQD0 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC9.3□□□□□ -0.92
Rpl39lQ9CQD0 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC9.3□□□□□ -0.92
Rpl39lQ9CQD0 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC9.3□□□□□ -0.92
Rpl39lQ9CQD0 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Rpl39lQ9CQD0 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Rpl39lQ9CQD0 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
Rpl39lQ9CQD0 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Rpl39lQ9CQD0 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Rpl39lQ9CQD0 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
Rpl39lQ9CQD0 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC9.3□□□□□ -0.92
Rpl39lQ9CQD0 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC9.3□□□□□ -0.92
Rpl39lQ9CQD0 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC9.3□□□□□ -0.92
Rpl39lQ9CQD0 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Rpl39lQ9CQD0 Kcnt1-201ENSMUST00000037580 5881 ntAPPRIS P3 TSL 1 (best) BASIC9.3□□□□□ -0.92
Rpl39lQ9CQD0 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Rpl39lQ9CQD0 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Rpl39lQ9CQD0 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Rpl39lQ9CQD0 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC9.3□□□□□ -0.92
Rpl39lQ9CQD0 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Rpl39lQ9CQD0 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Rpl39lQ9CQD0 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
Rpl39lQ9CQD0 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
Rpl39lQ9CQD0 Tspoap1-201ENSMUST00000039627 7616 ntAPPRIS P2 TSL 5 BASIC9.3□□□□□ -0.92
Rpl39lQ9CQD0 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Rpl39lQ9CQD0 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
Rpl39lQ9CQD0 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC9.29□□□□□ -0.92
Rpl39lQ9CQD0 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Rpl39lQ9CQD0 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC9.29□□□□□ -0.92
Rpl39lQ9CQD0 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC9.29□□□□□ -0.92
Rpl39lQ9CQD0 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC9.29□□□□□ -0.92
Rpl39lQ9CQD0 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Rpl39lQ9CQD0 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC9.29□□□□□ -0.92
Rpl39lQ9CQD0 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC9.29□□□□□ -0.92
Rpl39lQ9CQD0 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Rpl39lQ9CQD0 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Rpl39lQ9CQD0 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Rpl39lQ9CQD0 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Rpl39lQ9CQD0 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC9.29□□□□□ -0.92
Rpl39lQ9CQD0 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Rpl39lQ9CQD0 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC9.29□□□□□ -0.92
Rpl39lQ9CQD0 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC9.29□□□□□ -0.92
Rpl39lQ9CQD0 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC9.29□□□□□ -0.92
Rpl39lQ9CQD0 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC9.29□□□□□ -0.92
Rpl39lQ9CQD0 Gm18041-201ENSMUST00000218210 618 ntBASIC9.29□□□□□ -0.92
Rpl39lQ9CQD0 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Rpl39lQ9CQD0 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC9.29□□□□□ -0.92
Rpl39lQ9CQD0 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC9.29□□□□□ -0.92
Retrieved 100 of 76,532 protein–RNA pairs in 46.4 ms