Protein–RNA interactions for Protein: Q99J62

Rfc4, Replication factor C subunit 4, mousemouse

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfc4Q99J62 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC16.44■□□□□ 0.22
Rfc4Q99J62 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Rfc4Q99J62 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Rfc4Q99J62 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
Rfc4Q99J62 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
Rfc4Q99J62 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Rfc4Q99J62 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Rfc4Q99J62 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Rfc4Q99J62 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Rfc4Q99J62 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
Rfc4Q99J62 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC16.44■□□□□ 0.22
Rfc4Q99J62 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC16.43■□□□□ 0.22
Rfc4Q99J62 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC16.43■□□□□ 0.22
Rfc4Q99J62 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Rfc4Q99J62 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Rfc4Q99J62 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC16.43■□□□□ 0.22
Rfc4Q99J62 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Rfc4Q99J62 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Rfc4Q99J62 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Rfc4Q99J62 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Rfc4Q99J62 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Rfc4Q99J62 AC154527.2-201ENSMUST00000225256 1466 ntBASIC16.43■□□□□ 0.22
Rfc4Q99J62 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Rfc4Q99J62 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Rfc4Q99J62 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Rfc4Q99J62 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Rfc4Q99J62 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Rfc4Q99J62 Gm4804-201ENSMUST00000182234 999 ntBASIC16.43■□□□□ 0.22
Rfc4Q99J62 Gm6283-201ENSMUST00000182369 1000 ntBASIC16.43■□□□□ 0.22
Rfc4Q99J62 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC16.43■□□□□ 0.22
Rfc4Q99J62 Gm18307-201ENSMUST00000206864 949 ntBASIC16.43■□□□□ 0.22
Rfc4Q99J62 Gm6007-201ENSMUST00000208170 823 ntBASIC16.43■□□□□ 0.22
Rfc4Q99J62 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC16.43■□□□□ 0.22
Rfc4Q99J62 Gm17795-201ENSMUST00000214505 757 ntBASIC16.43■□□□□ 0.22
Rfc4Q99J62 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Rfc4Q99J62 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Rfc4Q99J62 Gm5356-201ENSMUST00000093326 615 ntBASIC16.43■□□□□ 0.22
Rfc4Q99J62 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC16.43■□□□□ 0.22
Rfc4Q99J62 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Rfc4Q99J62 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Rfc4Q99J62 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Rfc4Q99J62 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Rfc4Q99J62 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Rfc4Q99J62 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Rfc4Q99J62 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Rfc4Q99J62 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Rfc4Q99J62 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Rfc4Q99J62 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rfc4Q99J62 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rfc4Q99J62 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Rfc4Q99J62 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rfc4Q99J62 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rfc4Q99J62 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rfc4Q99J62 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Rfc4Q99J62 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC16.42■□□□□ 0.22
Rfc4Q99J62 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Rfc4Q99J62 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Rfc4Q99J62 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC16.42■□□□□ 0.22
Rfc4Q99J62 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rfc4Q99J62 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rfc4Q99J62 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rfc4Q99J62 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rfc4Q99J62 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rfc4Q99J62 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rfc4Q99J62 Camk2g-217ENSMUST00000226630 1937 ntBASIC16.42■□□□□ 0.22
Rfc4Q99J62 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rfc4Q99J62 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC16.42■□□□□ 0.22
Rfc4Q99J62 Gm9768-201ENSMUST00000206007 2861 ntBASIC16.42■□□□□ 0.22
Rfc4Q99J62 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rfc4Q99J62 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rfc4Q99J62 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rfc4Q99J62 AC114008.2-201ENSMUST00000227699 1347 ntBASIC16.42■□□□□ 0.22
Rfc4Q99J62 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Rfc4Q99J62 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rfc4Q99J62 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rfc4Q99J62 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Rfc4Q99J62 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rfc4Q99J62 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rfc4Q99J62 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Rfc4Q99J62 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rfc4Q99J62 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rfc4Q99J62 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Rfc4Q99J62 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC16.41■□□□□ 0.22
Rfc4Q99J62 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Rfc4Q99J62 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Rfc4Q99J62 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC16.41■□□□□ 0.22
Rfc4Q99J62 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC16.41■□□□□ 0.22
Rfc4Q99J62 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC16.41■□□□□ 0.22
Rfc4Q99J62 Gm44799-201ENSMUST00000207639 1202 ntBASIC16.41■□□□□ 0.22
Rfc4Q99J62 Gm7446-201ENSMUST00000221035 1240 ntBASIC16.41■□□□□ 0.22
Rfc4Q99J62 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rfc4Q99J62 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC16.41■□□□□ 0.22
Rfc4Q99J62 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rfc4Q99J62 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rfc4Q99J62 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rfc4Q99J62 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Rfc4Q99J62 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rfc4Q99J62 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Rfc4Q99J62 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rfc4Q99J62 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms