Protein–RNA interactions for Protein: Q91XY2

Pcdhga6, Protocadherin gamma A6, mousemouse

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga6Q91XY2 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdhga6Q91XY2 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdhga6Q91XY2 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdhga6Q91XY2 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdhga6Q91XY2 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdhga6Q91XY2 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdhga6Q91XY2 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdhga6Q91XY2 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdhga6Q91XY2 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Pcdhga6Q91XY2 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Pcdhga6Q91XY2 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdhga6Q91XY2 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdhga6Q91XY2 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdhga6Q91XY2 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Pcdhga6Q91XY2 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Pcdhga6Q91XY2 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Pcdhga6Q91XY2 AC163637.1-201ENSMUST00000215491 1894 ntBASIC14.27□□□□□ -0.12
Pcdhga6Q91XY2 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
Pcdhga6Q91XY2 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Pcdhga6Q91XY2 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.12
Pcdhga6Q91XY2 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC14.27□□□□□ -0.12
Pcdhga6Q91XY2 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Pcdhga6Q91XY2 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC14.27□□□□□ -0.12
Pcdhga6Q91XY2 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC14.27□□□□□ -0.12
Pcdhga6Q91XY2 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Pcdhga6Q91XY2 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC14.27□□□□□ -0.12
Pcdhga6Q91XY2 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
Pcdhga6Q91XY2 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC14.27□□□□□ -0.13
Pcdhga6Q91XY2 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC14.27□□□□□ -0.13
Pcdhga6Q91XY2 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC14.27□□□□□ -0.13
Pcdhga6Q91XY2 Gm15806-201ENSMUST00000120696 955 ntBASIC14.27□□□□□ -0.13
Pcdhga6Q91XY2 Gm15593-201ENSMUST00000122085 1008 ntBASIC14.27□□□□□ -0.13
Pcdhga6Q91XY2 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC14.27□□□□□ -0.13
Pcdhga6Q91XY2 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Pcdhga6Q91XY2 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Pcdhga6Q91XY2 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Pcdhga6Q91XY2 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Pcdhga6Q91XY2 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Pcdhga6Q91XY2 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Pcdhga6Q91XY2 Gm46209-201ENSMUST00000217912 553 ntBASIC14.27□□□□□ -0.13
Pcdhga6Q91XY2 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Pcdhga6Q91XY2 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Pcdhga6Q91XY2 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Pcdhga6Q91XY2 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC14.27□□□□□ -0.13
Pcdhga6Q91XY2 BC037039-201ENSMUST00000192003 2205 ntBASIC14.27□□□□□ -0.13
Pcdhga6Q91XY2 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Pcdhga6Q91XY2 Gm27528-202ENSMUST00000222916 2012 ntBASIC14.27□□□□□ -0.13
Pcdhga6Q91XY2 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Pcdhga6Q91XY2 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Pcdhga6Q91XY2 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Pcdhga6Q91XY2 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdhga6Q91XY2 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdhga6Q91XY2 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdhga6Q91XY2 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC14.26□□□□□ -0.13
Pcdhga6Q91XY2 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Pcdhga6Q91XY2 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdhga6Q91XY2 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdhga6Q91XY2 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Pcdhga6Q91XY2 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Pcdhga6Q91XY2 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdhga6Q91XY2 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdhga6Q91XY2 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdhga6Q91XY2 Cd63-ps-201ENSMUST00000145417 875 ntBASIC14.26□□□□□ -0.13
Pcdhga6Q91XY2 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdhga6Q91XY2 Gm7556-201ENSMUST00000201178 1084 ntBASIC14.26□□□□□ -0.13
Pcdhga6Q91XY2 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdhga6Q91XY2 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC14.26□□□□□ -0.13
Pcdhga6Q91XY2 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdhga6Q91XY2 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdhga6Q91XY2 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdhga6Q91XY2 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdhga6Q91XY2 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdhga6Q91XY2 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdhga6Q91XY2 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Pcdhga6Q91XY2 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Pcdhga6Q91XY2 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdhga6Q91XY2 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdhga6Q91XY2 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC14.26□□□□□ -0.13
Pcdhga6Q91XY2 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdhga6Q91XY2 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC14.26□□□□□ -0.13
Pcdhga6Q91XY2 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdhga6Q91XY2 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdhga6Q91XY2 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Pcdhga6Q91XY2 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC14.25□□□□□ -0.13
Pcdhga6Q91XY2 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdhga6Q91XY2 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Pcdhga6Q91XY2 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Pcdhga6Q91XY2 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdhga6Q91XY2 Gm37728-201ENSMUST00000195025 2292 ntBASIC14.25□□□□□ -0.13
Pcdhga6Q91XY2 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdhga6Q91XY2 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdhga6Q91XY2 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC14.25□□□□□ -0.13
Pcdhga6Q91XY2 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdhga6Q91XY2 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Pcdhga6Q91XY2 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdhga6Q91XY2 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdhga6Q91XY2 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdhga6Q91XY2 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Pcdhga6Q91XY2 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdhga6Q91XY2 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 42 ms