Protein–RNA interactions for Protein: Q8VE91

Retreg1d, Reticulophagy regulator 1, mousemouse

Predictions only

Length 480 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Retreg1dQ8VE91 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Retreg1dQ8VE91 Gm14780-201ENSMUST00000118387 2737 ntBASIC14.22□□□□□ -0.13
Retreg1dQ8VE91 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Retreg1dQ8VE91 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Retreg1dQ8VE91 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Retreg1dQ8VE91 Tcf21-202ENSMUST00000218002 1788 ntBASIC14.22□□□□□ -0.13
Retreg1dQ8VE91 AC159621.2-201ENSMUST00000223519 1326 ntBASIC14.22□□□□□ -0.13
Retreg1dQ8VE91 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Retreg1dQ8VE91 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Retreg1dQ8VE91 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Retreg1dQ8VE91 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Retreg1dQ8VE91 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Retreg1dQ8VE91 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Retreg1dQ8VE91 Gm15693-201ENSMUST00000120470 637 ntBASIC14.22□□□□□ -0.13
Retreg1dQ8VE91 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC14.22□□□□□ -0.13
Retreg1dQ8VE91 Gm45504-201ENSMUST00000211407 2107 ntBASIC14.22□□□□□ -0.13
Retreg1dQ8VE91 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Retreg1dQ8VE91 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Retreg1dQ8VE91 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Retreg1dQ8VE91 Gm10313-201ENSMUST00000095320 1002 ntBASIC14.22□□□□□ -0.13
Retreg1dQ8VE91 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Retreg1dQ8VE91 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Retreg1dQ8VE91 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Retreg1dQ8VE91 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC14.22□□□□□ -0.13
Retreg1dQ8VE91 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Retreg1dQ8VE91 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Retreg1dQ8VE91 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Retreg1dQ8VE91 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Retreg1dQ8VE91 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Retreg1dQ8VE91 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC14.21□□□□□ -0.13
Retreg1dQ8VE91 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Retreg1dQ8VE91 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Retreg1dQ8VE91 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC14.21□□□□□ -0.13
Retreg1dQ8VE91 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Retreg1dQ8VE91 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC14.21□□□□□ -0.13
Retreg1dQ8VE91 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Retreg1dQ8VE91 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Retreg1dQ8VE91 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Retreg1dQ8VE91 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Retreg1dQ8VE91 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Retreg1dQ8VE91 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC14.21□□□□□ -0.13
Retreg1dQ8VE91 Gm27618-201ENSMUST00000183671 60 ntBASIC14.21□□□□□ -0.13
Retreg1dQ8VE91 Gm29541-201ENSMUST00000191351 678 ntBASIC14.21□□□□□ -0.13
Retreg1dQ8VE91 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Retreg1dQ8VE91 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Retreg1dQ8VE91 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Retreg1dQ8VE91 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Retreg1dQ8VE91 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Retreg1dQ8VE91 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Retreg1dQ8VE91 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Retreg1dQ8VE91 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC14.21□□□□□ -0.14
Retreg1dQ8VE91 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC14.21□□□□□ -0.14
Retreg1dQ8VE91 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Retreg1dQ8VE91 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Retreg1dQ8VE91 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
Retreg1dQ8VE91 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Retreg1dQ8VE91 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC14.2□□□□□ -0.14
Retreg1dQ8VE91 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Retreg1dQ8VE91 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Retreg1dQ8VE91 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Retreg1dQ8VE91 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Retreg1dQ8VE91 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Retreg1dQ8VE91 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Retreg1dQ8VE91 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC14.2□□□□□ -0.14
Retreg1dQ8VE91 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Retreg1dQ8VE91 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Retreg1dQ8VE91 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Retreg1dQ8VE91 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Retreg1dQ8VE91 Gm17837-201ENSMUST00000186435 985 ntBASIC14.2□□□□□ -0.14
Retreg1dQ8VE91 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC14.2□□□□□ -0.14
Retreg1dQ8VE91 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC14.2□□□□□ -0.14
Retreg1dQ8VE91 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC14.2□□□□□ -0.14
Retreg1dQ8VE91 AC158529.1-201ENSMUST00000223618 239 ntBASIC14.2□□□□□ -0.14
Retreg1dQ8VE91 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Retreg1dQ8VE91 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Retreg1dQ8VE91 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Retreg1dQ8VE91 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Retreg1dQ8VE91 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Retreg1dQ8VE91 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Retreg1dQ8VE91 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC14.2□□□□□ -0.14
Retreg1dQ8VE91 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Retreg1dQ8VE91 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Retreg1dQ8VE91 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Retreg1dQ8VE91 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Retreg1dQ8VE91 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Retreg1dQ8VE91 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Retreg1dQ8VE91 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Retreg1dQ8VE91 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC14.2□□□□□ -0.14
Retreg1dQ8VE91 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Retreg1dQ8VE91 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Retreg1dQ8VE91 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Retreg1dQ8VE91 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Retreg1dQ8VE91 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Retreg1dQ8VE91 Gm6756-201ENSMUST00000180647 1620 ntBASIC14.19□□□□□ -0.14
Retreg1dQ8VE91 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Retreg1dQ8VE91 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Retreg1dQ8VE91 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Retreg1dQ8VE91 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Retreg1dQ8VE91 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Retreg1dQ8VE91 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 50.6 ms