Protein–RNA interactions for Protein: Q8R5L3

Vps39, Vam6/Vps39-like protein, mousemouse

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps39Q8R5L3 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Vps39Q8R5L3 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Vps39Q8R5L3 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Vps39Q8R5L3 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Vps39Q8R5L3 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Vps39Q8R5L3 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Vps39Q8R5L3 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Vps39Q8R5L3 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Vps39Q8R5L3 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Vps39Q8R5L3 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Vps39Q8R5L3 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Vps39Q8R5L3 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Vps39Q8R5L3 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Vps39Q8R5L3 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Vps39Q8R5L3 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Vps39Q8R5L3 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Vps39Q8R5L3 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC14.34□□□□□ -0.11
Vps39Q8R5L3 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Vps39Q8R5L3 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Vps39Q8R5L3 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Vps39Q8R5L3 Gm12892-201ENSMUST00000117367 1146 ntBASIC14.34□□□□□ -0.11
Vps39Q8R5L3 Gm12260-201ENSMUST00000122447 411 ntBASIC14.34□□□□□ -0.11
Vps39Q8R5L3 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Vps39Q8R5L3 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC14.34□□□□□ -0.11
Vps39Q8R5L3 Gm27920-201ENSMUST00000183953 96 ntBASIC14.34□□□□□ -0.11
Vps39Q8R5L3 Klk2-ps-201ENSMUST00000205342 571 ntBASIC14.34□□□□□ -0.11
Vps39Q8R5L3 Gm45683-201ENSMUST00000210825 1247 ntBASIC14.34□□□□□ -0.11
Vps39Q8R5L3 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC14.34□□□□□ -0.11
Vps39Q8R5L3 AC133598.3-202ENSMUST00000224219 531 ntBASIC14.34□□□□□ -0.11
Vps39Q8R5L3 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
Vps39Q8R5L3 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Vps39Q8R5L3 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Vps39Q8R5L3 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
Vps39Q8R5L3 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Vps39Q8R5L3 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Vps39Q8R5L3 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.11
Vps39Q8R5L3 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Vps39Q8R5L3 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Vps39Q8R5L3 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.11
Vps39Q8R5L3 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Vps39Q8R5L3 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Vps39Q8R5L3 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Vps39Q8R5L3 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Vps39Q8R5L3 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Vps39Q8R5L3 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Vps39Q8R5L3 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Vps39Q8R5L3 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Vps39Q8R5L3 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Vps39Q8R5L3 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC14.33□□□□□ -0.12
Vps39Q8R5L3 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
Vps39Q8R5L3 Mir3113-201ENSMUST00000175478 76 ntBASIC14.33□□□□□ -0.12
Vps39Q8R5L3 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Vps39Q8R5L3 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Vps39Q8R5L3 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Vps39Q8R5L3 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Vps39Q8R5L3 CT030684.1-201ENSMUST00000227292 914 ntBASIC14.33□□□□□ -0.12
Vps39Q8R5L3 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Vps39Q8R5L3 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Vps39Q8R5L3 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Vps39Q8R5L3 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Vps39Q8R5L3 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Vps39Q8R5L3 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC14.33□□□□□ -0.12
Vps39Q8R5L3 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Vps39Q8R5L3 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Vps39Q8R5L3 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Vps39Q8R5L3 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC14.33□□□□□ -0.12
Vps39Q8R5L3 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Vps39Q8R5L3 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
Vps39Q8R5L3 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Vps39Q8R5L3 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Vps39Q8R5L3 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Vps39Q8R5L3 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Vps39Q8R5L3 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Vps39Q8R5L3 Pcgf5-211ENSMUST00000225920 6443 ntBASIC14.33□□□□□ -0.12
Vps39Q8R5L3 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Vps39Q8R5L3 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Vps39Q8R5L3 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Vps39Q8R5L3 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Vps39Q8R5L3 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Vps39Q8R5L3 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Vps39Q8R5L3 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC14.32□□□□□ -0.12
Vps39Q8R5L3 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Vps39Q8R5L3 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Vps39Q8R5L3 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Vps39Q8R5L3 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Vps39Q8R5L3 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC14.32□□□□□ -0.12
Vps39Q8R5L3 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Vps39Q8R5L3 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Vps39Q8R5L3 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Vps39Q8R5L3 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Vps39Q8R5L3 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Vps39Q8R5L3 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Vps39Q8R5L3 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC14.32□□□□□ -0.12
Vps39Q8R5L3 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Vps39Q8R5L3 Gm6226-201ENSMUST00000117765 1146 ntBASIC14.32□□□□□ -0.12
Vps39Q8R5L3 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Vps39Q8R5L3 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC14.32□□□□□ -0.12
Vps39Q8R5L3 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Vps39Q8R5L3 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Vps39Q8R5L3 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 75.4 ms