Protein–RNA interactions for Protein: Q8R1N4

Nudcd3, NudC domain-containing protein 3, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nudcd3Q8R1N4 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nudcd3Q8R1N4 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nudcd3Q8R1N4 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nudcd3Q8R1N4 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nudcd3Q8R1N4 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nudcd3Q8R1N4 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nudcd3Q8R1N4 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Nudcd3Q8R1N4 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Nudcd3Q8R1N4 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nudcd3Q8R1N4 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nudcd3Q8R1N4 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Nudcd3Q8R1N4 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nudcd3Q8R1N4 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nudcd3Q8R1N4 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nudcd3Q8R1N4 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Nudcd3Q8R1N4 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Nudcd3Q8R1N4 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Nudcd3Q8R1N4 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC14.31□□□□□ -0.12
Nudcd3Q8R1N4 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Nudcd3Q8R1N4 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nudcd3Q8R1N4 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nudcd3Q8R1N4 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Nudcd3Q8R1N4 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nudcd3Q8R1N4 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nudcd3Q8R1N4 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
Nudcd3Q8R1N4 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nudcd3Q8R1N4 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nudcd3Q8R1N4 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nudcd3Q8R1N4 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC14.31□□□□□ -0.12
Nudcd3Q8R1N4 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nudcd3Q8R1N4 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Nudcd3Q8R1N4 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Nudcd3Q8R1N4 Gm4899-201ENSMUST00000178708 719 ntBASIC14.31□□□□□ -0.12
Nudcd3Q8R1N4 Gm6944-201ENSMUST00000182449 1006 ntBASIC14.31□□□□□ -0.12
Nudcd3Q8R1N4 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Nudcd3Q8R1N4 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC14.31□□□□□ -0.12
Nudcd3Q8R1N4 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nudcd3Q8R1N4 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Nudcd3Q8R1N4 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nudcd3Q8R1N4 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nudcd3Q8R1N4 Gm5366-201ENSMUST00000215494 1338 ntBASIC14.31□□□□□ -0.12
Nudcd3Q8R1N4 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nudcd3Q8R1N4 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC14.31□□□□□ -0.12
Nudcd3Q8R1N4 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nudcd3Q8R1N4 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nudcd3Q8R1N4 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nudcd3Q8R1N4 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC14.31□□□□□ -0.12
Nudcd3Q8R1N4 Gm38102-201ENSMUST00000192791 1935 ntBASIC14.31□□□□□ -0.12
Nudcd3Q8R1N4 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nudcd3Q8R1N4 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Nudcd3Q8R1N4 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nudcd3Q8R1N4 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Nudcd3Q8R1N4 Gm9252-201ENSMUST00000172364 1602 ntBASIC14.3□□□□□ -0.12
Nudcd3Q8R1N4 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Nudcd3Q8R1N4 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Nudcd3Q8R1N4 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Nudcd3Q8R1N4 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Nudcd3Q8R1N4 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Nudcd3Q8R1N4 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Nudcd3Q8R1N4 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Nudcd3Q8R1N4 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC14.3□□□□□ -0.12
Nudcd3Q8R1N4 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Nudcd3Q8R1N4 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC14.3□□□□□ -0.12
Nudcd3Q8R1N4 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Nudcd3Q8R1N4 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Nudcd3Q8R1N4 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Nudcd3Q8R1N4 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC14.3□□□□□ -0.12
Nudcd3Q8R1N4 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Nudcd3Q8R1N4 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Nudcd3Q8R1N4 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Nudcd3Q8R1N4 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
Nudcd3Q8R1N4 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Nudcd3Q8R1N4 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC14.3□□□□□ -0.12
Nudcd3Q8R1N4 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Nudcd3Q8R1N4 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Nudcd3Q8R1N4 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC14.3□□□□□ -0.12
Nudcd3Q8R1N4 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Nudcd3Q8R1N4 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Nudcd3Q8R1N4 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Nudcd3Q8R1N4 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Nudcd3Q8R1N4 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Nudcd3Q8R1N4 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Nudcd3Q8R1N4 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nudcd3Q8R1N4 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nudcd3Q8R1N4 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nudcd3Q8R1N4 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nudcd3Q8R1N4 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Nudcd3Q8R1N4 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nudcd3Q8R1N4 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nudcd3Q8R1N4 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC14.29□□□□□ -0.12
Nudcd3Q8R1N4 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nudcd3Q8R1N4 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nudcd3Q8R1N4 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC14.29□□□□□ -0.12
Nudcd3Q8R1N4 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nudcd3Q8R1N4 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nudcd3Q8R1N4 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nudcd3Q8R1N4 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Nudcd3Q8R1N4 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Nudcd3Q8R1N4 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC14.29□□□□□ -0.12
Nudcd3Q8R1N4 Gm8597-201ENSMUST00000191525 1109 ntBASIC14.29□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 70.2 ms