Protein–RNA interactions for Protein: Q8R0S1

Atf7, Cyclic AMP-dependent transcription factor ATF-7, mousemouse

Predictions only

Length 413 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf7Q8R0S1 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC16.89■□□□□ 0.3
Atf7Q8R0S1 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Atf7Q8R0S1 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.3
Atf7Q8R0S1 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.3
Atf7Q8R0S1 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Atf7Q8R0S1 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
Atf7Q8R0S1 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Atf7Q8R0S1 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Atf7Q8R0S1 Gm9109-201ENSMUST00000120254 1405 ntBASIC16.89■□□□□ 0.29
Atf7Q8R0S1 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Atf7Q8R0S1 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Atf7Q8R0S1 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
Atf7Q8R0S1 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Atf7Q8R0S1 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Atf7Q8R0S1 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Atf7Q8R0S1 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Atf7Q8R0S1 Gm8584-201ENSMUST00000171982 758 ntBASIC16.89■□□□□ 0.29
Atf7Q8R0S1 Gm9824-201ENSMUST00000178707 561 ntBASIC16.89■□□□□ 0.29
Atf7Q8R0S1 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Atf7Q8R0S1 Chchd1-203ENSMUST00000224633 557 ntBASIC16.89■□□□□ 0.29
Atf7Q8R0S1 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
Atf7Q8R0S1 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC16.89■□□□□ 0.29
Atf7Q8R0S1 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Atf7Q8R0S1 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
Atf7Q8R0S1 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Atf7Q8R0S1 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC16.89■□□□□ 0.29
Atf7Q8R0S1 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Atf7Q8R0S1 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Atf7Q8R0S1 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Atf7Q8R0S1 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Atf7Q8R0S1 Gm28182-201ENSMUST00000188354 2477 ntBASIC16.89■□□□□ 0.29
Atf7Q8R0S1 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Atf7Q8R0S1 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Atf7Q8R0S1 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Atf7Q8R0S1 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Atf7Q8R0S1 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Atf7Q8R0S1 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Atf7Q8R0S1 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Atf7Q8R0S1 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC16.88■□□□□ 0.29
Atf7Q8R0S1 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Atf7Q8R0S1 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
Atf7Q8R0S1 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Atf7Q8R0S1 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Atf7Q8R0S1 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Atf7Q8R0S1 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Atf7Q8R0S1 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Atf7Q8R0S1 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC16.88■□□□□ 0.29
Atf7Q8R0S1 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC16.88■□□□□ 0.29
Atf7Q8R0S1 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Atf7Q8R0S1 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Atf7Q8R0S1 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Atf7Q8R0S1 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Atf7Q8R0S1 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Atf7Q8R0S1 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Atf7Q8R0S1 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Atf7Q8R0S1 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Atf7Q8R0S1 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC16.87■□□□□ 0.29
Atf7Q8R0S1 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Atf7Q8R0S1 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Atf7Q8R0S1 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Atf7Q8R0S1 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Atf7Q8R0S1 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Atf7Q8R0S1 AC121801.1-201ENSMUST00000225363 1899 ntBASIC16.87■□□□□ 0.29
Atf7Q8R0S1 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Atf7Q8R0S1 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Atf7Q8R0S1 Gm22065-201ENSMUST00000103753 110 ntBASIC16.87■□□□□ 0.29
Atf7Q8R0S1 Gm22066-201ENSMUST00000103761 110 ntBASIC16.87■□□□□ 0.29
Atf7Q8R0S1 Gm24932-201ENSMUST00000103763 110 ntBASIC16.87■□□□□ 0.29
Atf7Q8R0S1 Gm24115-201ENSMUST00000103799 110 ntBASIC16.87■□□□□ 0.29
Atf7Q8R0S1 Gm22190-201ENSMUST00000103827 110 ntBASIC16.87■□□□□ 0.29
Atf7Q8R0S1 Gm22191-201ENSMUST00000103831 110 ntBASIC16.87■□□□□ 0.29
Atf7Q8R0S1 Gm24721-201ENSMUST00000103849 110 ntBASIC16.87■□□□□ 0.29
Atf7Q8R0S1 Gm28018-201ENSMUST00000103869 110 ntBASIC16.87■□□□□ 0.29
Atf7Q8R0S1 Gm26399-201ENSMUST00000103937 110 ntBASIC16.87■□□□□ 0.29
Atf7Q8R0S1 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC16.87■□□□□ 0.29
Atf7Q8R0S1 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC16.87■□□□□ 0.29
Atf7Q8R0S1 Gm13823-201ENSMUST00000119930 345 ntBASIC16.87■□□□□ 0.29
Atf7Q8R0S1 Gm6222-201ENSMUST00000120787 396 ntBASIC16.87■□□□□ 0.29
Atf7Q8R0S1 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC16.87■□□□□ 0.29
Atf7Q8R0S1 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Atf7Q8R0S1 Gm25349-201ENSMUST00000177728 110 ntBASIC16.87■□□□□ 0.29
Atf7Q8R0S1 Gm23616-201ENSMUST00000177797 110 ntBASIC16.87■□□□□ 0.29
Atf7Q8R0S1 Gm25871-201ENSMUST00000177816 110 ntBASIC16.87■□□□□ 0.29
Atf7Q8R0S1 Gm24752-201ENSMUST00000178240 110 ntBASIC16.87■□□□□ 0.29
Atf7Q8R0S1 Gm24496-201ENSMUST00000178287 110 ntBASIC16.87■□□□□ 0.29
Atf7Q8R0S1 Gm25649-201ENSMUST00000178476 110 ntBASIC16.87■□□□□ 0.29
Atf7Q8R0S1 Gm25548-201ENSMUST00000178681 110 ntBASIC16.87■□□□□ 0.29
Atf7Q8R0S1 Gm23147-201ENSMUST00000178841 110 ntBASIC16.87■□□□□ 0.29
Atf7Q8R0S1 Gm26095-201ENSMUST00000179270 110 ntBASIC16.87■□□□□ 0.29
Atf7Q8R0S1 Gm22171-201ENSMUST00000179283 110 ntBASIC16.87■□□□□ 0.29
Atf7Q8R0S1 Gm23936-201ENSMUST00000179354 110 ntBASIC16.87■□□□□ 0.29
Atf7Q8R0S1 Gm22619-201ENSMUST00000179516 110 ntBASIC16.87■□□□□ 0.29
Atf7Q8R0S1 Gm25255-201ENSMUST00000179579 110 ntBASIC16.87■□□□□ 0.29
Atf7Q8R0S1 Gm24755-201ENSMUST00000179691 110 ntBASIC16.87■□□□□ 0.29
Atf7Q8R0S1 Gm26506-201ENSMUST00000179692 110 ntBASIC16.87■□□□□ 0.29
Atf7Q8R0S1 Gm25086-201ENSMUST00000179931 110 ntBASIC16.87■□□□□ 0.29
Atf7Q8R0S1 Gm23243-201ENSMUST00000180047 110 ntBASIC16.87■□□□□ 0.29
Atf7Q8R0S1 Gm24659-201ENSMUST00000180212 110 ntBASIC16.87■□□□□ 0.29
Atf7Q8R0S1 Gm24169-201ENSMUST00000180244 110 ntBASIC16.87■□□□□ 0.29
Atf7Q8R0S1 Gm23689-201ENSMUST00000180354 110 ntBASIC16.87■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 52.7 ms