Protein–RNA interactions for Protein: Q8K4L0

Ddx54, ATP-dependent RNA helicase DDX54, mousemouse

Known RBP Predictions only

Length 874 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx54Q8K4L0 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ddx54Q8K4L0 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ddx54Q8K4L0 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ddx54Q8K4L0 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Ddx54Q8K4L0 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ddx54Q8K4L0 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ddx54Q8K4L0 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ddx54Q8K4L0 Gulp1-203ENSMUST00000160854 1399 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Ddx54Q8K4L0 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ddx54Q8K4L0 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ddx54Q8K4L0 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ddx54Q8K4L0 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ddx54Q8K4L0 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ddx54Q8K4L0 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ddx54Q8K4L0 Gm11557-201ENSMUST00000120200 1008 ntBASIC18.55■□□□□ 0.56
Ddx54Q8K4L0 Gm12216-202ENSMUST00000120776 826 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
Ddx54Q8K4L0 Proscos-202ENSMUST00000178990 666 ntBASIC18.55■□□□□ 0.56
Ddx54Q8K4L0 Gm8927-201ENSMUST00000181978 981 ntBASIC18.55■□□□□ 0.56
Ddx54Q8K4L0 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Ddx54Q8K4L0 Gm38000-201ENSMUST00000192390 1215 ntBASIC18.55■□□□□ 0.56
Ddx54Q8K4L0 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC18.55■□□□□ 0.56
Ddx54Q8K4L0 Gm37312-201ENSMUST00000195753 685 ntTSL 5 BASIC18.55■□□□□ 0.56
Ddx54Q8K4L0 Gm45865-201ENSMUST00000211815 945 ntBASIC18.55■□□□□ 0.56
Ddx54Q8K4L0 AC155637.1-201ENSMUST00000218560 636 ntBASIC18.55■□□□□ 0.56
Ddx54Q8K4L0 Gm18473-201ENSMUST00000220543 868 ntBASIC18.55■□□□□ 0.56
Ddx54Q8K4L0 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC18.55■□□□□ 0.56
Ddx54Q8K4L0 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ddx54Q8K4L0 Gm3222-201ENSMUST00000071282 990 ntBASIC18.55■□□□□ 0.56
Ddx54Q8K4L0 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
Ddx54Q8K4L0 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ddx54Q8K4L0 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ddx54Q8K4L0 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Ddx54Q8K4L0 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ddx54Q8K4L0 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ddx54Q8K4L0 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ddx54Q8K4L0 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ddx54Q8K4L0 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Ddx54Q8K4L0 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ddx54Q8K4L0 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ddx54Q8K4L0 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ddx54Q8K4L0 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Ddx54Q8K4L0 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ddx54Q8K4L0 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ddx54Q8K4L0 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ddx54Q8K4L0 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ddx54Q8K4L0 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Ddx54Q8K4L0 Fam110a-202ENSMUST00000109863 1284 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ddx54Q8K4L0 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ddx54Q8K4L0 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC18.54■□□□□ 0.56
Ddx54Q8K4L0 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC18.54■□□□□ 0.56
Ddx54Q8K4L0 Gm27682-201ENSMUST00000183930 110 ntBASIC18.54■□□□□ 0.56
Ddx54Q8K4L0 Gm7118-201ENSMUST00000200167 1003 ntBASIC18.54■□□□□ 0.56
Ddx54Q8K4L0 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Ddx54Q8K4L0 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ddx54Q8K4L0 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Ddx54Q8K4L0 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Ddx54Q8K4L0 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ddx54Q8K4L0 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC18.54■□□□□ 0.56
Ddx54Q8K4L0 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ddx54Q8K4L0 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC18.54■□□□□ 0.56
Ddx54Q8K4L0 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ddx54Q8K4L0 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ddx54Q8K4L0 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ddx54Q8K4L0 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ddx54Q8K4L0 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ddx54Q8K4L0 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ddx54Q8K4L0 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ddx54Q8K4L0 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
Ddx54Q8K4L0 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Ddx54Q8K4L0 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ddx54Q8K4L0 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ddx54Q8K4L0 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ddx54Q8K4L0 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC18.53■□□□□ 0.56
Ddx54Q8K4L0 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ddx54Q8K4L0 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Ddx54Q8K4L0 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ddx54Q8K4L0 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Ddx54Q8K4L0 Gm17111-201ENSMUST00000169981 411 ntTSL 3 BASIC18.53■□□□□ 0.56
Ddx54Q8K4L0 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC18.53■□□□□ 0.56
Ddx54Q8K4L0 Gm45720-201ENSMUST00000211881 484 ntTSL 3 BASIC18.53■□□□□ 0.56
Ddx54Q8K4L0 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC18.53■□□□□ 0.56
Ddx54Q8K4L0 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ddx54Q8K4L0 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ddx54Q8K4L0 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ddx54Q8K4L0 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC18.53■□□□□ 0.56
Ddx54Q8K4L0 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ddx54Q8K4L0 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
Ddx54Q8K4L0 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Ddx54Q8K4L0 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Ddx54Q8K4L0 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Ddx54Q8K4L0 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC18.52■□□□□ 0.56
Ddx54Q8K4L0 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Ddx54Q8K4L0 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Ddx54Q8K4L0 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Ddx54Q8K4L0 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
Ddx54Q8K4L0 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Ddx54Q8K4L0 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Ddx54Q8K4L0 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Ddx54Q8K4L0 Gm15738-202ENSMUST00000140892 427 ntTSL 2 BASIC18.52■□□□□ 0.56
Ddx54Q8K4L0 Men1-210ENSMUST00000166909 295 ntTSL 3 BASIC18.52■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 40.4 ms