Protein–RNA interactions for Protein: Q8K0T0

Rtn1, Reticulon-1, mousemouse

Predictions only

Length 780 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn1Q8K0T0 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Rtn1Q8K0T0 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC16.52■□□□□ 0.24
Rtn1Q8K0T0 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Rtn1Q8K0T0 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Rtn1Q8K0T0 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Rtn1Q8K0T0 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC16.52■□□□□ 0.24
Rtn1Q8K0T0 Gm45453-201ENSMUST00000211758 853 ntBASIC16.52■□□□□ 0.24
Rtn1Q8K0T0 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Rtn1Q8K0T0 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
Rtn1Q8K0T0 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Rtn1Q8K0T0 Gm13517-201ENSMUST00000120782 1495 ntBASIC16.52■□□□□ 0.23
Rtn1Q8K0T0 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Rtn1Q8K0T0 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC16.52■□□□□ 0.23
Rtn1Q8K0T0 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Rtn1Q8K0T0 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Rtn1Q8K0T0 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
Rtn1Q8K0T0 Gm37411-201ENSMUST00000194180 2282 ntBASIC16.52■□□□□ 0.23
Rtn1Q8K0T0 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Rtn1Q8K0T0 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
Rtn1Q8K0T0 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Rtn1Q8K0T0 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Rtn1Q8K0T0 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rtn1Q8K0T0 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rtn1Q8K0T0 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Rtn1Q8K0T0 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rtn1Q8K0T0 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Rtn1Q8K0T0 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Rtn1Q8K0T0 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC16.51■□□□□ 0.23
Rtn1Q8K0T0 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC16.51■□□□□ 0.23
Rtn1Q8K0T0 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC16.51■□□□□ 0.23
Rtn1Q8K0T0 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Rtn1Q8K0T0 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Rtn1Q8K0T0 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rtn1Q8K0T0 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC16.51■□□□□ 0.23
Rtn1Q8K0T0 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rtn1Q8K0T0 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rtn1Q8K0T0 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
Rtn1Q8K0T0 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rtn1Q8K0T0 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rtn1Q8K0T0 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rtn1Q8K0T0 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC16.51■□□□□ 0.23
Rtn1Q8K0T0 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rtn1Q8K0T0 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rtn1Q8K0T0 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rtn1Q8K0T0 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
Rtn1Q8K0T0 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rtn1Q8K0T0 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Rtn1Q8K0T0 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rtn1Q8K0T0 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Rtn1Q8K0T0 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC16.51■□□□□ 0.23
Rtn1Q8K0T0 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rtn1Q8K0T0 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rtn1Q8K0T0 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rtn1Q8K0T0 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rtn1Q8K0T0 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rtn1Q8K0T0 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rtn1Q8K0T0 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
Rtn1Q8K0T0 Gm8410-201ENSMUST00000117225 605 ntBASIC16.5■□□□□ 0.23
Rtn1Q8K0T0 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC16.5■□□□□ 0.23
Rtn1Q8K0T0 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC16.5■□□□□ 0.23
Rtn1Q8K0T0 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC16.5■□□□□ 0.23
Rtn1Q8K0T0 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Rtn1Q8K0T0 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rtn1Q8K0T0 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rtn1Q8K0T0 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC16.5■□□□□ 0.23
Rtn1Q8K0T0 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rtn1Q8K0T0 Gm45760-201ENSMUST00000212190 1782 ntBASIC16.5■□□□□ 0.23
Rtn1Q8K0T0 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC16.5■□□□□ 0.23
Rtn1Q8K0T0 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Rtn1Q8K0T0 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rtn1Q8K0T0 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rtn1Q8K0T0 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rtn1Q8K0T0 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rtn1Q8K0T0 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rtn1Q8K0T0 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC16.5■□□□□ 0.23
Rtn1Q8K0T0 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rtn1Q8K0T0 BC001981-202ENSMUST00000191393 1545 ntBASIC16.5■□□□□ 0.23
Rtn1Q8K0T0 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rtn1Q8K0T0 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Rtn1Q8K0T0 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Rtn1Q8K0T0 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Rtn1Q8K0T0 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Rtn1Q8K0T0 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Rtn1Q8K0T0 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Rtn1Q8K0T0 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
Rtn1Q8K0T0 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC16.49■□□□□ 0.23
Rtn1Q8K0T0 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC16.49■□□□□ 0.23
Rtn1Q8K0T0 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Rtn1Q8K0T0 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Rtn1Q8K0T0 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC16.49■□□□□ 0.23
Rtn1Q8K0T0 Gm13616-201ENSMUST00000120600 222 ntBASIC16.49■□□□□ 0.23
Rtn1Q8K0T0 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Rtn1Q8K0T0 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Rtn1Q8K0T0 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Rtn1Q8K0T0 Gm28630-201ENSMUST00000187806 498 ntBASIC16.49■□□□□ 0.23
Rtn1Q8K0T0 Gm37171-201ENSMUST00000192636 1185 ntBASIC16.49■□□□□ 0.23
Rtn1Q8K0T0 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Rtn1Q8K0T0 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Rtn1Q8K0T0 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC16.49■□□□□ 0.23
Rtn1Q8K0T0 AC090659.2-201ENSMUST00000225378 1186 ntBASIC16.49■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 43.1 ms