Protein–RNA interactions for Protein: Q8CIK8

Rfwd3, E3 ubiquitin-protein ligase RFWD3, mousemouse

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfwd3Q8CIK8 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Rfwd3Q8CIK8 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Rfwd3Q8CIK8 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC13.49□□□□□ -0.25
Rfwd3Q8CIK8 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Rfwd3Q8CIK8 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Rfwd3Q8CIK8 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC13.49□□□□□ -0.25
Rfwd3Q8CIK8 Gm37230-201ENSMUST00000194491 818 ntBASIC13.49□□□□□ -0.25
Rfwd3Q8CIK8 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Rfwd3Q8CIK8 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Rfwd3Q8CIK8 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Rfwd3Q8CIK8 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Rfwd3Q8CIK8 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Rfwd3Q8CIK8 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Rfwd3Q8CIK8 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Rfwd3Q8CIK8 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Rfwd3Q8CIK8 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Rfwd3Q8CIK8 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Rfwd3Q8CIK8 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Rfwd3Q8CIK8 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Rfwd3Q8CIK8 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Rfwd3Q8CIK8 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Rfwd3Q8CIK8 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Rfwd3Q8CIK8 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC13.49□□□□□ -0.25
Rfwd3Q8CIK8 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Rfwd3Q8CIK8 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Rfwd3Q8CIK8 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Rfwd3Q8CIK8 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Rfwd3Q8CIK8 Gm12620-201ENSMUST00000119791 1986 ntBASIC13.49□□□□□ -0.25
Rfwd3Q8CIK8 Gm12612-201ENSMUST00000140182 1986 ntBASIC13.49□□□□□ -0.25
Rfwd3Q8CIK8 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Rfwd3Q8CIK8 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
Rfwd3Q8CIK8 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
Rfwd3Q8CIK8 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Rfwd3Q8CIK8 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Rfwd3Q8CIK8 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC13.48□□□□□ -0.25
Rfwd3Q8CIK8 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Rfwd3Q8CIK8 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Rfwd3Q8CIK8 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Rfwd3Q8CIK8 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Rfwd3Q8CIK8 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Rfwd3Q8CIK8 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Rfwd3Q8CIK8 Gm42466-201ENSMUST00000202099 1301 ntBASIC13.48□□□□□ -0.25
Rfwd3Q8CIK8 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Rfwd3Q8CIK8 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Rfwd3Q8CIK8 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC13.48□□□□□ -0.25
Rfwd3Q8CIK8 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC13.48□□□□□ -0.25
Rfwd3Q8CIK8 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC13.48□□□□□ -0.25
Rfwd3Q8CIK8 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC13.48□□□□□ -0.25
Rfwd3Q8CIK8 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Rfwd3Q8CIK8 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Rfwd3Q8CIK8 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Rfwd3Q8CIK8 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
Rfwd3Q8CIK8 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
Rfwd3Q8CIK8 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Rfwd3Q8CIK8 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Rfwd3Q8CIK8 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC13.48□□□□□ -0.25
Rfwd3Q8CIK8 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Rfwd3Q8CIK8 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Rfwd3Q8CIK8 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Rfwd3Q8CIK8 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Rfwd3Q8CIK8 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC13.48□□□□□ -0.25
Rfwd3Q8CIK8 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Rfwd3Q8CIK8 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Rfwd3Q8CIK8 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Rfwd3Q8CIK8 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Rfwd3Q8CIK8 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Rfwd3Q8CIK8 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Rfwd3Q8CIK8 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Rfwd3Q8CIK8 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC13.47□□□□□ -0.25
Rfwd3Q8CIK8 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Rfwd3Q8CIK8 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Rfwd3Q8CIK8 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Rfwd3Q8CIK8 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Rfwd3Q8CIK8 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC13.47□□□□□ -0.25
Rfwd3Q8CIK8 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Rfwd3Q8CIK8 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Rfwd3Q8CIK8 Carlr-201ENSMUST00000181515 2574 ntBASIC13.47□□□□□ -0.25
Rfwd3Q8CIK8 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Rfwd3Q8CIK8 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Rfwd3Q8CIK8 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Rfwd3Q8CIK8 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Rfwd3Q8CIK8 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Rfwd3Q8CIK8 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Rfwd3Q8CIK8 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Rfwd3Q8CIK8 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC13.47□□□□□ -0.25
Rfwd3Q8CIK8 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Rfwd3Q8CIK8 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC13.47□□□□□ -0.25
Rfwd3Q8CIK8 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Rfwd3Q8CIK8 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Rfwd3Q8CIK8 AC158529.1-201ENSMUST00000223618 239 ntBASIC13.47□□□□□ -0.25
Rfwd3Q8CIK8 AC140397.2-201ENSMUST00000224213 834 ntBASIC13.47□□□□□ -0.25
Rfwd3Q8CIK8 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Rfwd3Q8CIK8 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC13.47□□□□□ -0.25
Rfwd3Q8CIK8 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
Rfwd3Q8CIK8 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC13.47□□□□□ -0.25
Rfwd3Q8CIK8 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Rfwd3Q8CIK8 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Rfwd3Q8CIK8 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Rfwd3Q8CIK8 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Rfwd3Q8CIK8 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 87.6 ms