Protein–RNA interactions for Protein: Q8CHD8

Rab11fip3, Rab11 family-interacting protein 3, mousemouse

Predictions only

Length 1,047 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab11fip3Q8CHD8 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Rab11fip3Q8CHD8 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC18.47■□□□□ 0.55
Rab11fip3Q8CHD8 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Rab11fip3Q8CHD8 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
Rab11fip3Q8CHD8 Gm4081-201ENSMUST00000195287 1838 ntBASIC18.46■□□□□ 0.55
Rab11fip3Q8CHD8 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
Rab11fip3Q8CHD8 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Rab11fip3Q8CHD8 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Rab11fip3Q8CHD8 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Rab11fip3Q8CHD8 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Rab11fip3Q8CHD8 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Rab11fip3Q8CHD8 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
Rab11fip3Q8CHD8 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Rab11fip3Q8CHD8 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
Rab11fip3Q8CHD8 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Rab11fip3Q8CHD8 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC18.46■□□□□ 0.55
Rab11fip3Q8CHD8 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Rab11fip3Q8CHD8 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC18.46■□□□□ 0.55
Rab11fip3Q8CHD8 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Rab11fip3Q8CHD8 Gm8515-201ENSMUST00000194852 576 ntBASIC18.46■□□□□ 0.55
Rab11fip3Q8CHD8 Gm18018-201ENSMUST00000198273 408 ntBASIC18.46■□□□□ 0.55
Rab11fip3Q8CHD8 Gm18027-201ENSMUST00000218947 619 ntBASIC18.46■□□□□ 0.55
Rab11fip3Q8CHD8 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
Rab11fip3Q8CHD8 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
Rab11fip3Q8CHD8 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Rab11fip3Q8CHD8 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
Rab11fip3Q8CHD8 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Rab11fip3Q8CHD8 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC18.46■□□□□ 0.55
Rab11fip3Q8CHD8 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC18.46■□□□□ 0.55
Rab11fip3Q8CHD8 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
Rab11fip3Q8CHD8 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Rab11fip3Q8CHD8 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Rab11fip3Q8CHD8 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC18.46■□□□□ 0.54
Rab11fip3Q8CHD8 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC18.46■□□□□ 0.54
Rab11fip3Q8CHD8 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC18.45■□□□□ 0.54
Rab11fip3Q8CHD8 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Rab11fip3Q8CHD8 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Rab11fip3Q8CHD8 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
Rab11fip3Q8CHD8 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC18.45■□□□□ 0.54
Rab11fip3Q8CHD8 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Rab11fip3Q8CHD8 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC18.45■□□□□ 0.54
Rab11fip3Q8CHD8 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Rab11fip3Q8CHD8 Gm37917-201ENSMUST00000194711 392 ntBASIC18.45■□□□□ 0.54
Rab11fip3Q8CHD8 Gm37714-201ENSMUST00000194742 342 ntBASIC18.45■□□□□ 0.54
Rab11fip3Q8CHD8 Gm9794-201ENSMUST00000202370 423 ntBASIC18.45■□□□□ 0.54
Rab11fip3Q8CHD8 Gm45668-201ENSMUST00000211271 493 ntBASIC18.45■□□□□ 0.54
Rab11fip3Q8CHD8 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC18.45■□□□□ 0.54
Rab11fip3Q8CHD8 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC18.45■□□□□ 0.54
Rab11fip3Q8CHD8 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Rab11fip3Q8CHD8 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Rab11fip3Q8CHD8 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
Rab11fip3Q8CHD8 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Rab11fip3Q8CHD8 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Rab11fip3Q8CHD8 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
Rab11fip3Q8CHD8 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
Rab11fip3Q8CHD8 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
Rab11fip3Q8CHD8 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
Rab11fip3Q8CHD8 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Rab11fip3Q8CHD8 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Rab11fip3Q8CHD8 Gm14452-201ENSMUST00000118680 1632 ntBASIC18.45■□□□□ 0.54
Rab11fip3Q8CHD8 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Rab11fip3Q8CHD8 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC18.45■□□□□ 0.54
Rab11fip3Q8CHD8 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Rab11fip3Q8CHD8 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC18.45■□□□□ 0.54
Rab11fip3Q8CHD8 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Rab11fip3Q8CHD8 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC18.44■□□□□ 0.54
Rab11fip3Q8CHD8 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
Rab11fip3Q8CHD8 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Rab11fip3Q8CHD8 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
Rab11fip3Q8CHD8 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Rab11fip3Q8CHD8 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Rab11fip3Q8CHD8 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Rab11fip3Q8CHD8 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC18.44■□□□□ 0.54
Rab11fip3Q8CHD8 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC18.44■□□□□ 0.54
Rab11fip3Q8CHD8 Gm5354-201ENSMUST00000182417 973 ntBASIC18.44■□□□□ 0.54
Rab11fip3Q8CHD8 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Rab11fip3Q8CHD8 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Rab11fip3Q8CHD8 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC18.44■□□□□ 0.54
Rab11fip3Q8CHD8 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC18.44■□□□□ 0.54
Rab11fip3Q8CHD8 AC131690.1-201ENSMUST00000218406 374 ntBASIC18.44■□□□□ 0.54
Rab11fip3Q8CHD8 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Rab11fip3Q8CHD8 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
Rab11fip3Q8CHD8 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC18.44■□□□□ 0.54
Rab11fip3Q8CHD8 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Rab11fip3Q8CHD8 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
Rab11fip3Q8CHD8 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Rab11fip3Q8CHD8 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Rab11fip3Q8CHD8 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Rab11fip3Q8CHD8 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Rab11fip3Q8CHD8 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC18.43■□□□□ 0.54
Rab11fip3Q8CHD8 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC18.43■□□□□ 0.54
Rab11fip3Q8CHD8 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Rab11fip3Q8CHD8 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
Rab11fip3Q8CHD8 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Rab11fip3Q8CHD8 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Rab11fip3Q8CHD8 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Rab11fip3Q8CHD8 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Rab11fip3Q8CHD8 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Rab11fip3Q8CHD8 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Rab11fip3Q8CHD8 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC18.43■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 75.7 ms