Protein–RNA interactions for Protein: Q8CDV4

Trim52, Tripartite motif-containing 52, mousemouse

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim52Q8CDV4 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trim52Q8CDV4 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trim52Q8CDV4 Gm13829-201ENSMUST00000119600 138 ntBASIC17.55■□□□□ 0.4
Trim52Q8CDV4 Gm26464-201ENSMUST00000157094 305 ntBASIC17.55■□□□□ 0.4
Trim52Q8CDV4 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
Trim52Q8CDV4 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC17.55■□□□□ 0.4
Trim52Q8CDV4 Gm4971-201ENSMUST00000205991 1108 ntBASIC17.55■□□□□ 0.4
Trim52Q8CDV4 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trim52Q8CDV4 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trim52Q8CDV4 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Trim52Q8CDV4 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trim52Q8CDV4 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Trim52Q8CDV4 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Trim52Q8CDV4 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trim52Q8CDV4 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trim52Q8CDV4 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trim52Q8CDV4 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trim52Q8CDV4 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC17.55■□□□□ 0.4
Trim52Q8CDV4 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trim52Q8CDV4 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Trim52Q8CDV4 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trim52Q8CDV4 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC17.55■□□□□ 0.4
Trim52Q8CDV4 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Trim52Q8CDV4 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trim52Q8CDV4 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trim52Q8CDV4 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Trim52Q8CDV4 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC17.54■□□□□ 0.4
Trim52Q8CDV4 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trim52Q8CDV4 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trim52Q8CDV4 AC126549.2-201ENSMUST00000223997 1976 ntBASIC17.54■□□□□ 0.4
Trim52Q8CDV4 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Trim52Q8CDV4 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Trim52Q8CDV4 Gm15201-201ENSMUST00000136472 1210 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Trim52Q8CDV4 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Trim52Q8CDV4 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Trim52Q8CDV4 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trim52Q8CDV4 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trim52Q8CDV4 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trim52Q8CDV4 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trim52Q8CDV4 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trim52Q8CDV4 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trim52Q8CDV4 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Trim52Q8CDV4 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trim52Q8CDV4 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trim52Q8CDV4 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Trim52Q8CDV4 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC17.54■□□□□ 0.4
Trim52Q8CDV4 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trim52Q8CDV4 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trim52Q8CDV4 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trim52Q8CDV4 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trim52Q8CDV4 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trim52Q8CDV4 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC17.53■□□□□ 0.4
Trim52Q8CDV4 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trim52Q8CDV4 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trim52Q8CDV4 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trim52Q8CDV4 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trim52Q8CDV4 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trim52Q8CDV4 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Trim52Q8CDV4 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Trim52Q8CDV4 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC17.53■□□□□ 0.4
Trim52Q8CDV4 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Trim52Q8CDV4 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC17.53■□□□□ 0.4
Trim52Q8CDV4 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC17.53■□□□□ 0.4
Trim52Q8CDV4 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC17.53■□□□□ 0.4
Trim52Q8CDV4 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC17.53■□□□□ 0.4
Trim52Q8CDV4 Gm6266-201ENSMUST00000203844 806 ntBASIC17.53■□□□□ 0.4
Trim52Q8CDV4 Gm44719-201ENSMUST00000206404 149 ntBASIC17.53■□□□□ 0.4
Trim52Q8CDV4 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trim52Q8CDV4 AC131690.1-201ENSMUST00000218406 374 ntBASIC17.53■□□□□ 0.4
Trim52Q8CDV4 AC192088.1-201ENSMUST00000227561 301 ntBASIC17.53■□□□□ 0.4
Trim52Q8CDV4 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC17.53■□□□□ 0.4
Trim52Q8CDV4 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Trim52Q8CDV4 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trim52Q8CDV4 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Trim52Q8CDV4 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trim52Q8CDV4 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trim52Q8CDV4 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trim52Q8CDV4 CT010478.1-201ENSMUST00000220747 2787 ntBASIC17.53■□□□□ 0.4
Trim52Q8CDV4 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC17.53■□□□□ 0.4
Trim52Q8CDV4 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Trim52Q8CDV4 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trim52Q8CDV4 AC168058.1-201ENSMUST00000219521 2282 ntBASIC17.52■□□□□ 0.4
Trim52Q8CDV4 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Trim52Q8CDV4 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trim52Q8CDV4 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trim52Q8CDV4 Gm43509-201ENSMUST00000196551 2594 ntBASIC17.52■□□□□ 0.4
Trim52Q8CDV4 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trim52Q8CDV4 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC17.52■□□□□ 0.4
Trim52Q8CDV4 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trim52Q8CDV4 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Trim52Q8CDV4 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trim52Q8CDV4 Gm9347-201ENSMUST00000211473 1607 ntBASIC17.52■□□□□ 0.4
Trim52Q8CDV4 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Trim52Q8CDV4 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Trim52Q8CDV4 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
Trim52Q8CDV4 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Trim52Q8CDV4 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Trim52Q8CDV4 Gm8463-201ENSMUST00000208573 613 ntBASIC17.52■□□□□ 0.4
Trim52Q8CDV4 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trim52Q8CDV4 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC17.52■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 36.2 ms