Protein–RNA interactions for Protein: Q8CDD9

Lrif1, Ligand-dependent nuclear receptor-interacting factor 1, mousemouse

Predictions only

Length 755 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrif1Q8CDD9 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC14.17□□□□□ -0.14
Lrif1Q8CDD9 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Lrif1Q8CDD9 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC14.17□□□□□ -0.14
Lrif1Q8CDD9 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Lrif1Q8CDD9 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Lrif1Q8CDD9 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Lrif1Q8CDD9 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Lrif1Q8CDD9 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC14.17□□□□□ -0.14
Lrif1Q8CDD9 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Lrif1Q8CDD9 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Lrif1Q8CDD9 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC14.17□□□□□ -0.14
Lrif1Q8CDD9 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Lrif1Q8CDD9 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC14.17□□□□□ -0.14
Lrif1Q8CDD9 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Lrif1Q8CDD9 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Lrif1Q8CDD9 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Lrif1Q8CDD9 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC14.16□□□□□ -0.14
Lrif1Q8CDD9 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Lrif1Q8CDD9 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Lrif1Q8CDD9 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC14.16□□□□□ -0.14
Lrif1Q8CDD9 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Lrif1Q8CDD9 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Lrif1Q8CDD9 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Lrif1Q8CDD9 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Lrif1Q8CDD9 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Lrif1Q8CDD9 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Lrif1Q8CDD9 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Lrif1Q8CDD9 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Lrif1Q8CDD9 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Lrif1Q8CDD9 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Lrif1Q8CDD9 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Lrif1Q8CDD9 Gm5682-201ENSMUST00000173402 505 ntBASIC14.16□□□□□ -0.14
Lrif1Q8CDD9 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Lrif1Q8CDD9 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Lrif1Q8CDD9 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
Lrif1Q8CDD9 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Lrif1Q8CDD9 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Lrif1Q8CDD9 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Lrif1Q8CDD9 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Lrif1Q8CDD9 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC14.16□□□□□ -0.14
Lrif1Q8CDD9 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Lrif1Q8CDD9 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Lrif1Q8CDD9 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Lrif1Q8CDD9 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC14.16□□□□□ -0.14
Lrif1Q8CDD9 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Lrif1Q8CDD9 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Lrif1Q8CDD9 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Lrif1Q8CDD9 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Lrif1Q8CDD9 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Lrif1Q8CDD9 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Lrif1Q8CDD9 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Lrif1Q8CDD9 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Lrif1Q8CDD9 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Lrif1Q8CDD9 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Lrif1Q8CDD9 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Lrif1Q8CDD9 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC14.15□□□□□ -0.14
Lrif1Q8CDD9 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Lrif1Q8CDD9 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Lrif1Q8CDD9 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Lrif1Q8CDD9 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC14.15□□□□□ -0.14
Lrif1Q8CDD9 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Lrif1Q8CDD9 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Lrif1Q8CDD9 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Lrif1Q8CDD9 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Lrif1Q8CDD9 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Lrif1Q8CDD9 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Lrif1Q8CDD9 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Lrif1Q8CDD9 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Lrif1Q8CDD9 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Lrif1Q8CDD9 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Lrif1Q8CDD9 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Lrif1Q8CDD9 AC131586.3-201ENSMUST00000228355 1367 ntBASIC14.15□□□□□ -0.14
Lrif1Q8CDD9 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
Lrif1Q8CDD9 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Lrif1Q8CDD9 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC14.15□□□□□ -0.14
Lrif1Q8CDD9 Gm5253-201ENSMUST00000187104 1025 ntBASIC14.15□□□□□ -0.14
Lrif1Q8CDD9 Gm43332-201ENSMUST00000202511 1044 ntBASIC14.15□□□□□ -0.14
Lrif1Q8CDD9 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Lrif1Q8CDD9 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Lrif1Q8CDD9 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Lrif1Q8CDD9 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Lrif1Q8CDD9 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Lrif1Q8CDD9 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Lrif1Q8CDD9 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Lrif1Q8CDD9 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Lrif1Q8CDD9 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Lrif1Q8CDD9 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Lrif1Q8CDD9 Gm5184-201ENSMUST00000220417 1702 ntBASIC14.15□□□□□ -0.14
Lrif1Q8CDD9 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Lrif1Q8CDD9 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC14.15□□□□□ -0.14
Lrif1Q8CDD9 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Lrif1Q8CDD9 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Lrif1Q8CDD9 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Lrif1Q8CDD9 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Lrif1Q8CDD9 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Lrif1Q8CDD9 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Lrif1Q8CDD9 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC14.14□□□□□ -0.15
Lrif1Q8CDD9 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Lrif1Q8CDD9 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Lrif1Q8CDD9 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 56.9 ms