Protein–RNA interactions for Protein: Q8C6K9

Col6a6, Collagen alpha-6(VI) chain, mousemouse

Predictions only

Length 2,265 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6Q8C6K9 Gm38230-201ENSMUST00000193572 1159 ntBASIC12.86□□□□□ -0.35
Col6a6Q8C6K9 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC12.86□□□□□ -0.35
Col6a6Q8C6K9 AC155286.1-201ENSMUST00000218632 448 ntBASIC12.86□□□□□ -0.35
Col6a6Q8C6K9 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC12.86□□□□□ -0.35
Col6a6Q8C6K9 CT009713.10-202ENSMUST00000225734 696 ntBASIC12.86□□□□□ -0.35
Col6a6Q8C6K9 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Col6a6Q8C6K9 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Col6a6Q8C6K9 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Col6a6Q8C6K9 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Col6a6Q8C6K9 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Col6a6Q8C6K9 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC12.86□□□□□ -0.35
Col6a6Q8C6K9 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Col6a6Q8C6K9 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Col6a6Q8C6K9 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Col6a6Q8C6K9 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Col6a6Q8C6K9 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Col6a6Q8C6K9 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC12.86□□□□□ -0.35
Col6a6Q8C6K9 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Col6a6Q8C6K9 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Col6a6Q8C6K9 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Col6a6Q8C6K9 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Col6a6Q8C6K9 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC12.86□□□□□ -0.35
Col6a6Q8C6K9 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Col6a6Q8C6K9 Gm5425-201ENSMUST00000214125 459 ntBASIC12.86□□□□□ -0.35
Col6a6Q8C6K9 Eaf2-201ENSMUST00000023537 849 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Col6a6Q8C6K9 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Col6a6Q8C6K9 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC12.86□□□□□ -0.35
Col6a6Q8C6K9 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Col6a6Q8C6K9 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Col6a6Q8C6K9 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Col6a6Q8C6K9 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Col6a6Q8C6K9 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Col6a6Q8C6K9 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Col6a6Q8C6K9 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Col6a6Q8C6K9 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Col6a6Q8C6K9 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Col6a6Q8C6K9 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Col6a6Q8C6K9 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Col6a6Q8C6K9 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Col6a6Q8C6K9 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Col6a6Q8C6K9 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Col6a6Q8C6K9 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC12.85□□□□□ -0.35
Col6a6Q8C6K9 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC12.85□□□□□ -0.35
Col6a6Q8C6K9 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Col6a6Q8C6K9 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Col6a6Q8C6K9 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Col6a6Q8C6K9 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Col6a6Q8C6K9 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Col6a6Q8C6K9 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Col6a6Q8C6K9 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Col6a6Q8C6K9 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Col6a6Q8C6K9 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Col6a6Q8C6K9 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Col6a6Q8C6K9 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Col6a6Q8C6K9 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Col6a6Q8C6K9 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Col6a6Q8C6K9 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Col6a6Q8C6K9 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Col6a6Q8C6K9 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Col6a6Q8C6K9 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Col6a6Q8C6K9 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Col6a6Q8C6K9 Trav13-3-201ENSMUST00000117226 336 ntBASIC12.85□□□□□ -0.35
Col6a6Q8C6K9 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Col6a6Q8C6K9 Trav4d-2-201ENSMUST00000120914 335 ntBASIC12.85□□□□□ -0.35
Col6a6Q8C6K9 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Col6a6Q8C6K9 Gm8565-201ENSMUST00000183259 1014 ntBASIC12.85□□□□□ -0.35
Col6a6Q8C6K9 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC12.85□□□□□ -0.35
Col6a6Q8C6K9 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Col6a6Q8C6K9 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Col6a6Q8C6K9 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Col6a6Q8C6K9 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Col6a6Q8C6K9 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Col6a6Q8C6K9 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Col6a6Q8C6K9 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Col6a6Q8C6K9 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Col6a6Q8C6K9 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Col6a6Q8C6K9 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Col6a6Q8C6K9 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Col6a6Q8C6K9 Gm11661-201ENSMUST00000121761 1327 ntBASIC12.84□□□□□ -0.35
Col6a6Q8C6K9 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Col6a6Q8C6K9 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Col6a6Q8C6K9 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Col6a6Q8C6K9 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC12.84□□□□□ -0.35
Col6a6Q8C6K9 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC12.84□□□□□ -0.35
Col6a6Q8C6K9 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Col6a6Q8C6K9 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC12.84□□□□□ -0.35
Col6a6Q8C6K9 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Col6a6Q8C6K9 Nudt17-202ENSMUST00000171249 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Col6a6Q8C6K9 Gm6283-201ENSMUST00000182369 1000 ntBASIC12.84□□□□□ -0.35
Col6a6Q8C6K9 Gm28911-201ENSMUST00000188837 117 ntBASIC12.84□□□□□ -0.35
Col6a6Q8C6K9 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Col6a6Q8C6K9 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Col6a6Q8C6K9 Gm6983-201ENSMUST00000214912 628 ntBASIC12.84□□□□□ -0.35
Col6a6Q8C6K9 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC12.84□□□□□ -0.35
Col6a6Q8C6K9 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Col6a6Q8C6K9 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC12.84□□□□□ -0.35
Col6a6Q8C6K9 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Col6a6Q8C6K9 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Col6a6Q8C6K9 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Col6a6Q8C6K9 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 34.8 ms