Protein–RNA interactions for Protein: Q8C120

Sh3rf3, SH3 domain-containing RING finger protein 3, mousemouse

Predictions only

Length 878 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf3Q8C120 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC14.92□□□□□ -0.02
Sh3rf3Q8C120 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Sh3rf3Q8C120 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Sh3rf3Q8C120 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Sh3rf3Q8C120 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Sh3rf3Q8C120 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
Sh3rf3Q8C120 Gm45630-201ENSMUST00000210243 1911 ntBASIC14.92□□□□□ -0.02
Sh3rf3Q8C120 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Sh3rf3Q8C120 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Sh3rf3Q8C120 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Sh3rf3Q8C120 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Sh3rf3Q8C120 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC14.92□□□□□ -0.02
Sh3rf3Q8C120 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Sh3rf3Q8C120 Gm14042-201ENSMUST00000120139 833 ntBASIC14.92□□□□□ -0.02
Sh3rf3Q8C120 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC14.92□□□□□ -0.02
Sh3rf3Q8C120 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC14.92□□□□□ -0.02
Sh3rf3Q8C120 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
Sh3rf3Q8C120 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Sh3rf3Q8C120 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Sh3rf3Q8C120 Gm2213-201ENSMUST00000197485 688 ntBASIC14.92□□□□□ -0.02
Sh3rf3Q8C120 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Sh3rf3Q8C120 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Sh3rf3Q8C120 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Sh3rf3Q8C120 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Sh3rf3Q8C120 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Sh3rf3Q8C120 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Sh3rf3Q8C120 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Sh3rf3Q8C120 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Sh3rf3Q8C120 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Sh3rf3Q8C120 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Sh3rf3Q8C120 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Sh3rf3Q8C120 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Sh3rf3Q8C120 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Sh3rf3Q8C120 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Sh3rf3Q8C120 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Sh3rf3Q8C120 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
Sh3rf3Q8C120 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Sh3rf3Q8C120 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
Sh3rf3Q8C120 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC14.91□□□□□ -0.02
Sh3rf3Q8C120 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC14.91□□□□□ -0.02
Sh3rf3Q8C120 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Sh3rf3Q8C120 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Sh3rf3Q8C120 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Sh3rf3Q8C120 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Sh3rf3Q8C120 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Sh3rf3Q8C120 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Sh3rf3Q8C120 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC14.91□□□□□ -0.02
Sh3rf3Q8C120 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Sh3rf3Q8C120 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Sh3rf3Q8C120 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Sh3rf3Q8C120 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Sh3rf3Q8C120 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Sh3rf3Q8C120 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Sh3rf3Q8C120 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Sh3rf3Q8C120 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Sh3rf3Q8C120 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Sh3rf3Q8C120 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Sh3rf3Q8C120 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Sh3rf3Q8C120 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC14.91□□□□□ -0.02
Sh3rf3Q8C120 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC14.91□□□□□ -0.02
Sh3rf3Q8C120 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC14.91□□□□□ -0.02
Sh3rf3Q8C120 Mir6990-201ENSMUST00000183724 91 ntBASIC14.91□□□□□ -0.02
Sh3rf3Q8C120 Gm27702-201ENSMUST00000184512 56 ntBASIC14.91□□□□□ -0.02
Sh3rf3Q8C120 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC14.91□□□□□ -0.02
Sh3rf3Q8C120 Chchd1-203ENSMUST00000224633 557 ntBASIC14.91□□□□□ -0.02
Sh3rf3Q8C120 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Sh3rf3Q8C120 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Sh3rf3Q8C120 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Sh3rf3Q8C120 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Sh3rf3Q8C120 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Sh3rf3Q8C120 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Sh3rf3Q8C120 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Sh3rf3Q8C120 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Sh3rf3Q8C120 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Sh3rf3Q8C120 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Sh3rf3Q8C120 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Sh3rf3Q8C120 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Sh3rf3Q8C120 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Sh3rf3Q8C120 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Sh3rf3Q8C120 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Sh3rf3Q8C120 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
Sh3rf3Q8C120 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Sh3rf3Q8C120 Gm37411-201ENSMUST00000194180 2282 ntBASIC14.9□□□□□ -0.02
Sh3rf3Q8C120 AC166574.6-201ENSMUST00000227889 1806 ntBASIC14.9□□□□□ -0.02
Sh3rf3Q8C120 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Sh3rf3Q8C120 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Sh3rf3Q8C120 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC14.9□□□□□ -0.02
Sh3rf3Q8C120 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Sh3rf3Q8C120 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Sh3rf3Q8C120 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Sh3rf3Q8C120 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Sh3rf3Q8C120 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC14.9□□□□□ -0.02
Sh3rf3Q8C120 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Sh3rf3Q8C120 Gm43125-201ENSMUST00000201724 730 ntBASIC14.9□□□□□ -0.02
Sh3rf3Q8C120 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC14.9□□□□□ -0.02
Sh3rf3Q8C120 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Sh3rf3Q8C120 AC158529.1-201ENSMUST00000223618 239 ntBASIC14.9□□□□□ -0.02
Sh3rf3Q8C120 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Sh3rf3Q8C120 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Sh3rf3Q8C120 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 69.5 ms