Protein–RNA interactions for Protein: Q8BZT2

Sh3rf2, Putative E3 ubiquitin-protein ligase SH3RF2, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf2Q8BZT2 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Sh3rf2Q8BZT2 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Sh3rf2Q8BZT2 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
Sh3rf2Q8BZT2 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
Sh3rf2Q8BZT2 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC14.48□□□□□ -0.09
Sh3rf2Q8BZT2 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Sh3rf2Q8BZT2 Gm10766-202ENSMUST00000194123 606 ntBASIC14.48□□□□□ -0.09
Sh3rf2Q8BZT2 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Sh3rf2Q8BZT2 Gm7653-201ENSMUST00000214567 508 ntBASIC14.48□□□□□ -0.09
Sh3rf2Q8BZT2 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Sh3rf2Q8BZT2 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Sh3rf2Q8BZT2 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
Sh3rf2Q8BZT2 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Sh3rf2Q8BZT2 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Sh3rf2Q8BZT2 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Sh3rf2Q8BZT2 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Sh3rf2Q8BZT2 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Sh3rf2Q8BZT2 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Sh3rf2Q8BZT2 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Sh3rf2Q8BZT2 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Sh3rf2Q8BZT2 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Sh3rf2Q8BZT2 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Sh3rf2Q8BZT2 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Sh3rf2Q8BZT2 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Sh3rf2Q8BZT2 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Sh3rf2Q8BZT2 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Sh3rf2Q8BZT2 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Sh3rf2Q8BZT2 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Sh3rf2Q8BZT2 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Sh3rf2Q8BZT2 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
Sh3rf2Q8BZT2 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Sh3rf2Q8BZT2 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Sh3rf2Q8BZT2 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Sh3rf2Q8BZT2 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Sh3rf2Q8BZT2 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Sh3rf2Q8BZT2 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Sh3rf2Q8BZT2 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC14.47□□□□□ -0.09
Sh3rf2Q8BZT2 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Sh3rf2Q8BZT2 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC14.47□□□□□ -0.09
Sh3rf2Q8BZT2 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Sh3rf2Q8BZT2 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
Sh3rf2Q8BZT2 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
Sh3rf2Q8BZT2 Gm31326-201ENSMUST00000191856 1048 ntBASIC14.47□□□□□ -0.09
Sh3rf2Q8BZT2 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
Sh3rf2Q8BZT2 AC153872.1-201ENSMUST00000199539 128 ntBASIC14.47□□□□□ -0.09
Sh3rf2Q8BZT2 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC14.47□□□□□ -0.09
Sh3rf2Q8BZT2 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Sh3rf2Q8BZT2 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Sh3rf2Q8BZT2 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
Sh3rf2Q8BZT2 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Sh3rf2Q8BZT2 Gm37736-201ENSMUST00000193564 2802 ntBASIC14.47□□□□□ -0.09
Sh3rf2Q8BZT2 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Sh3rf2Q8BZT2 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC14.47□□□□□ -0.09
Sh3rf2Q8BZT2 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Sh3rf2Q8BZT2 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Sh3rf2Q8BZT2 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Sh3rf2Q8BZT2 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Sh3rf2Q8BZT2 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
Sh3rf2Q8BZT2 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Sh3rf2Q8BZT2 Gm38058-201ENSMUST00000194323 4368 ntBASIC14.47□□□□□ -0.09
Sh3rf2Q8BZT2 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Sh3rf2Q8BZT2 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Sh3rf2Q8BZT2 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Sh3rf2Q8BZT2 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Sh3rf2Q8BZT2 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Sh3rf2Q8BZT2 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
Sh3rf2Q8BZT2 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Sh3rf2Q8BZT2 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Sh3rf2Q8BZT2 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Sh3rf2Q8BZT2 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Sh3rf2Q8BZT2 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Sh3rf2Q8BZT2 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
Sh3rf2Q8BZT2 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Sh3rf2Q8BZT2 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC14.46□□□□□ -0.09
Sh3rf2Q8BZT2 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Sh3rf2Q8BZT2 Gm12490-201ENSMUST00000120255 560 ntBASIC14.46□□□□□ -0.09
Sh3rf2Q8BZT2 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC14.46□□□□□ -0.09
Sh3rf2Q8BZT2 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Sh3rf2Q8BZT2 Gm23984-201ENSMUST00000157139 203 ntBASIC14.46□□□□□ -0.09
Sh3rf2Q8BZT2 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC14.46□□□□□ -0.09
Sh3rf2Q8BZT2 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC14.46□□□□□ -0.09
Sh3rf2Q8BZT2 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC14.46□□□□□ -0.09
Sh3rf2Q8BZT2 AC154806.6-201ENSMUST00000228192 202 ntBASIC14.46□□□□□ -0.09
Sh3rf2Q8BZT2 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Sh3rf2Q8BZT2 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Sh3rf2Q8BZT2 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Sh3rf2Q8BZT2 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Sh3rf2Q8BZT2 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Sh3rf2Q8BZT2 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Sh3rf2Q8BZT2 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
Sh3rf2Q8BZT2 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Sh3rf2Q8BZT2 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Sh3rf2Q8BZT2 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Sh3rf2Q8BZT2 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
Sh3rf2Q8BZT2 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Sh3rf2Q8BZT2 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Sh3rf2Q8BZT2 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Sh3rf2Q8BZT2 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC14.46□□□□□ -0.09
Sh3rf2Q8BZT2 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
Sh3rf2Q8BZT2 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC14.46□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms