Protein–RNA interactions for Protein: Q8BRF7

Scfd1, Sec1 family domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 639 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scfd1Q8BRF7 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Scfd1Q8BRF7 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC16.3■□□□□ 0.2
Scfd1Q8BRF7 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Scfd1Q8BRF7 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Scfd1Q8BRF7 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Scfd1Q8BRF7 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Scfd1Q8BRF7 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Scfd1Q8BRF7 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Scfd1Q8BRF7 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Scfd1Q8BRF7 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Scfd1Q8BRF7 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Scfd1Q8BRF7 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Scfd1Q8BRF7 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Scfd1Q8BRF7 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Scfd1Q8BRF7 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Scfd1Q8BRF7 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Scfd1Q8BRF7 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Scfd1Q8BRF7 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC16.29■□□□□ 0.2
Scfd1Q8BRF7 Gm12091-201ENSMUST00000146791 830 ntBASIC16.29■□□□□ 0.2
Scfd1Q8BRF7 Gm5354-201ENSMUST00000182417 973 ntBASIC16.29■□□□□ 0.2
Scfd1Q8BRF7 Ighv5-13-201ENSMUST00000193550 290 ntBASIC16.29■□□□□ 0.2
Scfd1Q8BRF7 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Scfd1Q8BRF7 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Scfd1Q8BRF7 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Scfd1Q8BRF7 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC16.29■□□□□ 0.2
Scfd1Q8BRF7 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Scfd1Q8BRF7 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Scfd1Q8BRF7 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Scfd1Q8BRF7 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Scfd1Q8BRF7 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Scfd1Q8BRF7 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Scfd1Q8BRF7 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Scfd1Q8BRF7 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Scfd1Q8BRF7 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
Scfd1Q8BRF7 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Scfd1Q8BRF7 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Scfd1Q8BRF7 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC16.28■□□□□ 0.2
Scfd1Q8BRF7 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Scfd1Q8BRF7 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Scfd1Q8BRF7 Gm9115-201ENSMUST00000120192 1348 ntBASIC16.28■□□□□ 0.2
Scfd1Q8BRF7 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Scfd1Q8BRF7 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Scfd1Q8BRF7 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Scfd1Q8BRF7 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Scfd1Q8BRF7 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC16.28■□□□□ 0.2
Scfd1Q8BRF7 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Scfd1Q8BRF7 Mir6392-201ENSMUST00000184924 108 ntBASIC16.28■□□□□ 0.2
Scfd1Q8BRF7 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC16.28■□□□□ 0.2
Scfd1Q8BRF7 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Scfd1Q8BRF7 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Scfd1Q8BRF7 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC16.28■□□□□ 0.2
Scfd1Q8BRF7 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Scfd1Q8BRF7 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Scfd1Q8BRF7 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Scfd1Q8BRF7 Gm42690-201ENSMUST00000197921 1836 ntBASIC16.28■□□□□ 0.2
Scfd1Q8BRF7 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Scfd1Q8BRF7 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Scfd1Q8BRF7 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Scfd1Q8BRF7 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Scfd1Q8BRF7 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Scfd1Q8BRF7 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Scfd1Q8BRF7 Gm9768-201ENSMUST00000206007 2861 ntBASIC16.28■□□□□ 0.2
Scfd1Q8BRF7 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Scfd1Q8BRF7 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
Scfd1Q8BRF7 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Scfd1Q8BRF7 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Scfd1Q8BRF7 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Scfd1Q8BRF7 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Scfd1Q8BRF7 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Scfd1Q8BRF7 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Scfd1Q8BRF7 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Scfd1Q8BRF7 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Scfd1Q8BRF7 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Scfd1Q8BRF7 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
Scfd1Q8BRF7 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC16.27■□□□□ 0.2
Scfd1Q8BRF7 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Scfd1Q8BRF7 Gm9908-201ENSMUST00000211534 448 ntBASIC16.27■□□□□ 0.2
Scfd1Q8BRF7 Gm17795-201ENSMUST00000214505 757 ntBASIC16.27■□□□□ 0.2
Scfd1Q8BRF7 AC155286.1-201ENSMUST00000218632 448 ntBASIC16.27■□□□□ 0.2
Scfd1Q8BRF7 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC16.27■□□□□ 0.2
Scfd1Q8BRF7 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC16.27■□□□□ 0.2
Scfd1Q8BRF7 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
Scfd1Q8BRF7 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Scfd1Q8BRF7 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
Scfd1Q8BRF7 Gm37728-201ENSMUST00000195025 2292 ntBASIC16.27■□□□□ 0.2
Scfd1Q8BRF7 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Scfd1Q8BRF7 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Scfd1Q8BRF7 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Scfd1Q8BRF7 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Scfd1Q8BRF7 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC16.27■□□□□ 0.19
Scfd1Q8BRF7 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Scfd1Q8BRF7 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
Scfd1Q8BRF7 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Scfd1Q8BRF7 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Scfd1Q8BRF7 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Scfd1Q8BRF7 Gm44645-201ENSMUST00000205492 1653 ntBASIC16.27■□□□□ 0.19
Scfd1Q8BRF7 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Scfd1Q8BRF7 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
Scfd1Q8BRF7 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Scfd1Q8BRF7 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms