Protein–RNA interactions for Protein: Q8BLX7

Col16a1, Collagen alpha-1(XVI) chain, mousemouse

Predictions only

Length 1,580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col16a1Q8BLX7 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Col16a1Q8BLX7 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Col16a1Q8BLX7 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
Col16a1Q8BLX7 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Col16a1Q8BLX7 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Col16a1Q8BLX7 Gm44981-201ENSMUST00000205549 1943 ntBASIC18.44■□□□□ 0.54
Col16a1Q8BLX7 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC18.44■□□□□ 0.54
Col16a1Q8BLX7 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Col16a1Q8BLX7 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Col16a1Q8BLX7 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Col16a1Q8BLX7 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Col16a1Q8BLX7 Fbxl12-205ENSMUST00000140702 1555 ntBASIC18.44■□□□□ 0.54
Col16a1Q8BLX7 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC18.44■□□□□ 0.54
Col16a1Q8BLX7 Gm43758-201ENSMUST00000199500 367 ntBASIC18.44■□□□□ 0.54
Col16a1Q8BLX7 Gm43822-201ENSMUST00000200285 476 ntBASIC18.44■□□□□ 0.54
Col16a1Q8BLX7 Gm7783-201ENSMUST00000204795 781 ntBASIC18.44■□□□□ 0.54
Col16a1Q8BLX7 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC18.44■□□□□ 0.54
Col16a1Q8BLX7 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Col16a1Q8BLX7 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Col16a1Q8BLX7 Txn2-201ENSMUST00000005487 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Col16a1Q8BLX7 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Col16a1Q8BLX7 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Col16a1Q8BLX7 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Col16a1Q8BLX7 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Col16a1Q8BLX7 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Col16a1Q8BLX7 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC18.44■□□□□ 0.54
Col16a1Q8BLX7 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Col16a1Q8BLX7 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Col16a1Q8BLX7 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Col16a1Q8BLX7 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC18.43■□□□□ 0.54
Col16a1Q8BLX7 Erich1-201ENSMUST00000110813 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Col16a1Q8BLX7 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
Col16a1Q8BLX7 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Col16a1Q8BLX7 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Col16a1Q8BLX7 Gm16124-201ENSMUST00000146938 516 ntTSL 2 BASIC18.43■□□□□ 0.54
Col16a1Q8BLX7 Gm17344-201ENSMUST00000171173 1159 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Col16a1Q8BLX7 Gm8584-201ENSMUST00000171982 758 ntBASIC18.43■□□□□ 0.54
Col16a1Q8BLX7 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC18.43■□□□□ 0.54
Col16a1Q8BLX7 Tpd52l1-205ENSMUST00000215515 857 ntTSL 2 BASIC18.43■□□□□ 0.54
Col16a1Q8BLX7 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
Col16a1Q8BLX7 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Col16a1Q8BLX7 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Col16a1Q8BLX7 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Col16a1Q8BLX7 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC18.43■□□□□ 0.54
Col16a1Q8BLX7 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Col16a1Q8BLX7 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC18.43■□□□□ 0.54
Col16a1Q8BLX7 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Col16a1Q8BLX7 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Col16a1Q8BLX7 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Col16a1Q8BLX7 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Col16a1Q8BLX7 Gm11793-201ENSMUST00000120433 981 ntBASIC18.42■□□□□ 0.54
Col16a1Q8BLX7 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Col16a1Q8BLX7 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC18.42■□□□□ 0.54
Col16a1Q8BLX7 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Col16a1Q8BLX7 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Col16a1Q8BLX7 Gm33474-201ENSMUST00000199486 1231 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Col16a1Q8BLX7 Gm7619-201ENSMUST00000210649 1282 ntBASIC18.42■□□□□ 0.54
Col16a1Q8BLX7 Tas2r137-201ENSMUST00000064932 1073 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
Col16a1Q8BLX7 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Col16a1Q8BLX7 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC18.42■□□□□ 0.54
Col16a1Q8BLX7 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Col16a1Q8BLX7 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Col16a1Q8BLX7 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Col16a1Q8BLX7 Taldo1-204ENSMUST00000211654 1362 ntTSL 5 BASIC18.42■□□□□ 0.54
Col16a1Q8BLX7 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC18.42■□□□□ 0.54
Col16a1Q8BLX7 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Col16a1Q8BLX7 AC154412.1-201ENSMUST00000226540 2786 ntBASIC18.42■□□□□ 0.54
Col16a1Q8BLX7 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Col16a1Q8BLX7 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
Col16a1Q8BLX7 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Col16a1Q8BLX7 0610037L13Rik-205ENSMUST00000119394 741 ntTSL 3 BASIC18.42■□□□□ 0.54
Col16a1Q8BLX7 Tnni2-206ENSMUST00000149529 768 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
Col16a1Q8BLX7 Hoxb5os-202ENSMUST00000150698 596 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Col16a1Q8BLX7 Creb3-206ENSMUST00000167751 1212 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
Col16a1Q8BLX7 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Col16a1Q8BLX7 Gm37411-201ENSMUST00000194180 2282 ntBASIC18.42■□□□□ 0.54
Col16a1Q8BLX7 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Col16a1Q8BLX7 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Col16a1Q8BLX7 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Col16a1Q8BLX7 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Col16a1Q8BLX7 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Col16a1Q8BLX7 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Col16a1Q8BLX7 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Col16a1Q8BLX7 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
Col16a1Q8BLX7 1700045I11Rik-201ENSMUST00000194752 493 ntBASIC18.41■□□□□ 0.54
Col16a1Q8BLX7 Gm35409-201ENSMUST00000196412 1102 ntTSL 5 BASIC18.41■□□□□ 0.54
Col16a1Q8BLX7 Gm43133-201ENSMUST00000197472 463 ntBASIC18.41■□□□□ 0.54
Col16a1Q8BLX7 Gm12166-201ENSMUST00000093169 958 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
Col16a1Q8BLX7 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Col16a1Q8BLX7 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC18.41■□□□□ 0.54
Col16a1Q8BLX7 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Col16a1Q8BLX7 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Col16a1Q8BLX7 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC18.41■□□□□ 0.54
Col16a1Q8BLX7 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Col16a1Q8BLX7 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC18.41■□□□□ 0.54
Col16a1Q8BLX7 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Col16a1Q8BLX7 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Col16a1Q8BLX7 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Col16a1Q8BLX7 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Col16a1Q8BLX7 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 49.8 ms