Protein–RNA interactions for Protein: Q8BL06

Usp54, Inactive ubiquitin carboxyl-terminal hydrolase 54, mousemouse

Known RBP Predictions only

Length 1,588 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp54Q8BL06 Gpr18-201ENSMUST00000055475 1498 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Usp54Q8BL06 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Usp54Q8BL06 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Usp54Q8BL06 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
Usp54Q8BL06 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Usp54Q8BL06 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Usp54Q8BL06 Gm12050-201ENSMUST00000127483 615 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Usp54Q8BL06 S100a14-202ENSMUST00000167598 1059 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Usp54Q8BL06 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC19.99■□□□□ 0.79
Usp54Q8BL06 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Usp54Q8BL06 Gm43818-201ENSMUST00000200605 466 ntBASIC19.99■□□□□ 0.79
Usp54Q8BL06 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC19.99■□□□□ 0.79
Usp54Q8BL06 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC19.99■□□□□ 0.79
Usp54Q8BL06 Gm18934-201ENSMUST00000216671 1044 ntBASIC19.99■□□□□ 0.79
Usp54Q8BL06 AC154171.1-201ENSMUST00000224610 643 ntBASIC19.99■□□□□ 0.79
Usp54Q8BL06 Mrap-201ENSMUST00000038197 1001 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Usp54Q8BL06 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC19.99■□□□□ 0.79
Usp54Q8BL06 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Usp54Q8BL06 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Usp54Q8BL06 Gm37411-201ENSMUST00000194180 2282 ntBASIC19.99■□□□□ 0.79
Usp54Q8BL06 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Usp54Q8BL06 Zkscan14-203ENSMUST00000198959 2243 ntBASIC19.98■□□□□ 0.79
Usp54Q8BL06 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC19.98■□□□□ 0.79
Usp54Q8BL06 Rhox2g-201ENSMUST00000115169 795 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Usp54Q8BL06 Gm12537-201ENSMUST00000119266 1002 ntBASIC19.98■□□□□ 0.79
Usp54Q8BL06 Gm12070-201ENSMUST00000119551 1002 ntBASIC19.98■□□□□ 0.79
Usp54Q8BL06 Gm12671-201ENSMUST00000119978 1002 ntBASIC19.98■□□□□ 0.79
Usp54Q8BL06 Gm13292-201ENSMUST00000120014 1000 ntBASIC19.98■□□□□ 0.79
Usp54Q8BL06 Gm12403-201ENSMUST00000121384 959 ntBASIC19.98■□□□□ 0.79
Usp54Q8BL06 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC19.98■□□□□ 0.79
Usp54Q8BL06 Gm10359-201ENSMUST00000180167 1002 ntBASIC19.98■□□□□ 0.79
Usp54Q8BL06 Gm12033-201ENSMUST00000180654 1002 ntBASIC19.98■□□□□ 0.79
Usp54Q8BL06 Gm5559-201ENSMUST00000180755 1002 ntBASIC19.98■□□□□ 0.79
Usp54Q8BL06 Gm4335-201ENSMUST00000182581 1004 ntBASIC19.98■□□□□ 0.79
Usp54Q8BL06 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC19.98■□□□□ 0.79
Usp54Q8BL06 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Usp54Q8BL06 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Usp54Q8BL06 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC19.98■□□□□ 0.79
Usp54Q8BL06 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC19.98■□□□□ 0.79
Usp54Q8BL06 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Usp54Q8BL06 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Usp54Q8BL06 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
Usp54Q8BL06 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC19.98■□□□□ 0.79
Usp54Q8BL06 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Usp54Q8BL06 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
Usp54Q8BL06 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Usp54Q8BL06 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
Usp54Q8BL06 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
Usp54Q8BL06 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Usp54Q8BL06 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Usp54Q8BL06 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Usp54Q8BL06 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Usp54Q8BL06 Spdye4b-202ENSMUST00000159781 1128 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Usp54Q8BL06 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Usp54Q8BL06 Gm45930-201ENSMUST00000221330 292 ntBASIC19.97■□□□□ 0.79
Usp54Q8BL06 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Usp54Q8BL06 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Usp54Q8BL06 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Usp54Q8BL06 Trpt1-201ENSMUST00000088223 1142 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Usp54Q8BL06 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Usp54Q8BL06 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC19.97■□□□□ 0.79
Usp54Q8BL06 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Usp54Q8BL06 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Usp54Q8BL06 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC19.97■□□□□ 0.79
Usp54Q8BL06 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Usp54Q8BL06 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Usp54Q8BL06 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC19.97■□□□□ 0.79
Usp54Q8BL06 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Usp54Q8BL06 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Usp54Q8BL06 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
Usp54Q8BL06 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Usp54Q8BL06 Gm11793-201ENSMUST00000120433 981 ntBASIC19.96■□□□□ 0.79
Usp54Q8BL06 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC19.96■□□□□ 0.79
Usp54Q8BL06 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Usp54Q8BL06 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC19.96■□□□□ 0.79
Usp54Q8BL06 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC19.96■□□□□ 0.79
Usp54Q8BL06 Gm20083-202ENSMUST00000206663 1008 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Usp54Q8BL06 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC19.96■□□□□ 0.79
Usp54Q8BL06 Net1-207ENSMUST00000223258 597 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Usp54Q8BL06 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
Usp54Q8BL06 Olfr1209-201ENSMUST00000099809 933 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
Usp54Q8BL06 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Usp54Q8BL06 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Usp54Q8BL06 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Usp54Q8BL06 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Usp54Q8BL06 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Usp54Q8BL06 Gm44645-201ENSMUST00000205492 1653 ntBASIC19.96■□□□□ 0.79
Usp54Q8BL06 Gm10040-201ENSMUST00000080726 1662 ntBASIC19.96■□□□□ 0.79
Usp54Q8BL06 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Usp54Q8BL06 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Usp54Q8BL06 Mir686-201ENSMUST00000102174 109 ntBASIC19.95■□□□□ 0.78
Usp54Q8BL06 Gm10327-201ENSMUST00000105222 1002 ntBASIC19.95■□□□□ 0.78
Usp54Q8BL06 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Usp54Q8BL06 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Usp54Q8BL06 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC19.95■□□□□ 0.78
Usp54Q8BL06 Gm8801-201ENSMUST00000173255 1064 ntBASIC19.95■□□□□ 0.78
Usp54Q8BL06 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC19.95■□□□□ 0.78
Usp54Q8BL06 Gm39318-201ENSMUST00000214606 1118 ntTSL 3 BASIC19.95■□□□□ 0.78
Usp54Q8BL06 CT009713.10-202ENSMUST00000225734 696 ntBASIC19.95■□□□□ 0.78
Usp54Q8BL06 Eaf2-201ENSMUST00000023537 849 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms