Protein–RNA interactions for Protein: Q8BI21

Rnf38, E3 ubiquitin-protein ligase RNF38, mousemouse

Predictions only

Length 518 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf38Q8BI21 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC13.84□□□□□ -0.19
Rnf38Q8BI21 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC13.84□□□□□ -0.19
Rnf38Q8BI21 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Rnf38Q8BI21 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC13.84□□□□□ -0.19
Rnf38Q8BI21 Gm17968-201ENSMUST00000194902 784 ntBASIC13.84□□□□□ -0.19
Rnf38Q8BI21 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Rnf38Q8BI21 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Rnf38Q8BI21 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Rnf38Q8BI21 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Rnf38Q8BI21 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Rnf38Q8BI21 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Rnf38Q8BI21 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC13.84□□□□□ -0.19
Rnf38Q8BI21 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Rnf38Q8BI21 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Rnf38Q8BI21 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Rnf38Q8BI21 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC13.84□□□□□ -0.19
Rnf38Q8BI21 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Rnf38Q8BI21 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.19
Rnf38Q8BI21 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Rnf38Q8BI21 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Rnf38Q8BI21 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
Rnf38Q8BI21 Hgs-202ENSMUST00000106203 2901 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Rnf38Q8BI21 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Rnf38Q8BI21 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Rnf38Q8BI21 Nrros-208ENSMUST00000143682 3577 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Rnf38Q8BI21 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Rnf38Q8BI21 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC13.83□□□□□ -0.2
Rnf38Q8BI21 Gm14140-201ENSMUST00000119999 995 ntBASIC13.83□□□□□ -0.2
Rnf38Q8BI21 Gm14042-201ENSMUST00000120139 833 ntBASIC13.83□□□□□ -0.2
Rnf38Q8BI21 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Rnf38Q8BI21 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC13.83□□□□□ -0.2
Rnf38Q8BI21 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Rnf38Q8BI21 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Rnf38Q8BI21 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC13.83□□□□□ -0.2
Rnf38Q8BI21 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC13.83□□□□□ -0.2
Rnf38Q8BI21 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Rnf38Q8BI21 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Rnf38Q8BI21 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Rnf38Q8BI21 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Rnf38Q8BI21 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Rnf38Q8BI21 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Rnf38Q8BI21 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Rnf38Q8BI21 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Rnf38Q8BI21 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Rnf38Q8BI21 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Rnf38Q8BI21 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Rnf38Q8BI21 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Rnf38Q8BI21 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Rnf38Q8BI21 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rnf38Q8BI21 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rnf38Q8BI21 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Rnf38Q8BI21 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rnf38Q8BI21 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rnf38Q8BI21 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC13.82□□□□□ -0.2
Rnf38Q8BI21 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rnf38Q8BI21 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Rnf38Q8BI21 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rnf38Q8BI21 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rnf38Q8BI21 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Rnf38Q8BI21 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Rnf38Q8BI21 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC13.82□□□□□ -0.2
Rnf38Q8BI21 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Rnf38Q8BI21 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Rnf38Q8BI21 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rnf38Q8BI21 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC13.82□□□□□ -0.2
Rnf38Q8BI21 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rnf38Q8BI21 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rnf38Q8BI21 Gm5177-201ENSMUST00000183092 997 ntBASIC13.82□□□□□ -0.2
Rnf38Q8BI21 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC13.82□□□□□ -0.2
Rnf38Q8BI21 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rnf38Q8BI21 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rnf38Q8BI21 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Rnf38Q8BI21 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rnf38Q8BI21 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Rnf38Q8BI21 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Rnf38Q8BI21 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rnf38Q8BI21 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Rnf38Q8BI21 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rnf38Q8BI21 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rnf38Q8BI21 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rnf38Q8BI21 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Rnf38Q8BI21 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC13.82□□□□□ -0.2
Rnf38Q8BI21 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rnf38Q8BI21 Phf21a-206ENSMUST00000111292 2461 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rnf38Q8BI21 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rnf38Q8BI21 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rnf38Q8BI21 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rnf38Q8BI21 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rnf38Q8BI21 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Rnf38Q8BI21 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rnf38Q8BI21 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rnf38Q8BI21 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC13.81□□□□□ -0.2
Rnf38Q8BI21 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Rnf38Q8BI21 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rnf38Q8BI21 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Rnf38Q8BI21 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Rnf38Q8BI21 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rnf38Q8BI21 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rnf38Q8BI21 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rnf38Q8BI21 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 75.8 ms