Protein–RNA interactions for Protein: Q8BH88

Depdc1b, DEP domain-containing protein 1B, mousemouse

Predictions only

Length 529 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Depdc1bQ8BH88 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Depdc1bQ8BH88 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Depdc1bQ8BH88 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Depdc1bQ8BH88 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Depdc1bQ8BH88 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Depdc1bQ8BH88 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
Depdc1bQ8BH88 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Depdc1bQ8BH88 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
Depdc1bQ8BH88 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Depdc1bQ8BH88 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Depdc1bQ8BH88 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Depdc1bQ8BH88 Gm4081-201ENSMUST00000195287 1838 ntBASIC15.57■□□□□ 0.08
Depdc1bQ8BH88 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Depdc1bQ8BH88 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC15.57■□□□□ 0.08
Depdc1bQ8BH88 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
Depdc1bQ8BH88 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
Depdc1bQ8BH88 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Depdc1bQ8BH88 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
Depdc1bQ8BH88 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Depdc1bQ8BH88 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Depdc1bQ8BH88 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Depdc1bQ8BH88 Gm22065-201ENSMUST00000103753 110 ntBASIC15.57■□□□□ 0.08
Depdc1bQ8BH88 Gm22066-201ENSMUST00000103761 110 ntBASIC15.57■□□□□ 0.08
Depdc1bQ8BH88 Gm24932-201ENSMUST00000103763 110 ntBASIC15.57■□□□□ 0.08
Depdc1bQ8BH88 Gm24115-201ENSMUST00000103799 110 ntBASIC15.57■□□□□ 0.08
Depdc1bQ8BH88 Gm22190-201ENSMUST00000103827 110 ntBASIC15.57■□□□□ 0.08
Depdc1bQ8BH88 Gm22191-201ENSMUST00000103831 110 ntBASIC15.57■□□□□ 0.08
Depdc1bQ8BH88 Gm24721-201ENSMUST00000103849 110 ntBASIC15.57■□□□□ 0.08
Depdc1bQ8BH88 Gm28018-201ENSMUST00000103869 110 ntBASIC15.57■□□□□ 0.08
Depdc1bQ8BH88 Gm26399-201ENSMUST00000103937 110 ntBASIC15.57■□□□□ 0.08
Depdc1bQ8BH88 Mir449b-201ENSMUST00000104833 80 ntBASIC15.57■□□□□ 0.08
Depdc1bQ8BH88 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC15.57■□□□□ 0.08
Depdc1bQ8BH88 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Depdc1bQ8BH88 Gm25349-201ENSMUST00000177728 110 ntBASIC15.57■□□□□ 0.08
Depdc1bQ8BH88 Gm23616-201ENSMUST00000177797 110 ntBASIC15.57■□□□□ 0.08
Depdc1bQ8BH88 Gm25871-201ENSMUST00000177816 110 ntBASIC15.57■□□□□ 0.08
Depdc1bQ8BH88 Gm24752-201ENSMUST00000178240 110 ntBASIC15.57■□□□□ 0.08
Depdc1bQ8BH88 Gm24496-201ENSMUST00000178287 110 ntBASIC15.57■□□□□ 0.08
Depdc1bQ8BH88 Gm25649-201ENSMUST00000178476 110 ntBASIC15.57■□□□□ 0.08
Depdc1bQ8BH88 Gm25548-201ENSMUST00000178681 110 ntBASIC15.57■□□□□ 0.08
Depdc1bQ8BH88 Gm23147-201ENSMUST00000178841 110 ntBASIC15.57■□□□□ 0.08
Depdc1bQ8BH88 Gm26095-201ENSMUST00000179270 110 ntBASIC15.57■□□□□ 0.08
Depdc1bQ8BH88 Gm22171-201ENSMUST00000179283 110 ntBASIC15.57■□□□□ 0.08
Depdc1bQ8BH88 Gm23936-201ENSMUST00000179354 110 ntBASIC15.57■□□□□ 0.08
Depdc1bQ8BH88 Gm22619-201ENSMUST00000179516 110 ntBASIC15.57■□□□□ 0.08
Depdc1bQ8BH88 Gm25255-201ENSMUST00000179579 110 ntBASIC15.57■□□□□ 0.08
Depdc1bQ8BH88 Gm24755-201ENSMUST00000179691 110 ntBASIC15.57■□□□□ 0.08
Depdc1bQ8BH88 Gm26506-201ENSMUST00000179692 110 ntBASIC15.57■□□□□ 0.08
Depdc1bQ8BH88 Gm25086-201ENSMUST00000179931 110 ntBASIC15.57■□□□□ 0.08
Depdc1bQ8BH88 Gm23243-201ENSMUST00000180047 110 ntBASIC15.57■□□□□ 0.08
Depdc1bQ8BH88 Gm24659-201ENSMUST00000180212 110 ntBASIC15.57■□□□□ 0.08
Depdc1bQ8BH88 Gm24169-201ENSMUST00000180244 110 ntBASIC15.57■□□□□ 0.08
Depdc1bQ8BH88 Gm23689-201ENSMUST00000180354 110 ntBASIC15.57■□□□□ 0.08
Depdc1bQ8BH88 Gm27359-201ENSMUST00000184153 110 ntBASIC15.57■□□□□ 0.08
Depdc1bQ8BH88 Gm27785-201ENSMUST00000184268 110 ntBASIC15.57■□□□□ 0.08
Depdc1bQ8BH88 Gm27466-201ENSMUST00000184396 110 ntBASIC15.57■□□□□ 0.08
Depdc1bQ8BH88 Gm27703-201ENSMUST00000184836 110 ntBASIC15.57■□□□□ 0.08
Depdc1bQ8BH88 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Depdc1bQ8BH88 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC15.57■□□□□ 0.08
Depdc1bQ8BH88 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Depdc1bQ8BH88 Gm9182-201ENSMUST00000217829 639 ntBASIC15.57■□□□□ 0.08
Depdc1bQ8BH88 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Depdc1bQ8BH88 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC15.57■□□□□ 0.08
Depdc1bQ8BH88 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Depdc1bQ8BH88 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Depdc1bQ8BH88 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Depdc1bQ8BH88 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Depdc1bQ8BH88 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Depdc1bQ8BH88 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
Depdc1bQ8BH88 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Depdc1bQ8BH88 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC15.57■□□□□ 0.08
Depdc1bQ8BH88 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Depdc1bQ8BH88 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
Depdc1bQ8BH88 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Depdc1bQ8BH88 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
Depdc1bQ8BH88 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Depdc1bQ8BH88 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
Depdc1bQ8BH88 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
Depdc1bQ8BH88 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
Depdc1bQ8BH88 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Depdc1bQ8BH88 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Depdc1bQ8BH88 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Depdc1bQ8BH88 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
Depdc1bQ8BH88 Gm25287-201ENSMUST00000103846 110 ntBASIC15.56■□□□□ 0.08
Depdc1bQ8BH88 Gm22918-201ENSMUST00000103855 110 ntBASIC15.56■□□□□ 0.08
Depdc1bQ8BH88 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Depdc1bQ8BH88 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC15.56■□□□□ 0.08
Depdc1bQ8BH88 Gm10253-201ENSMUST00000194270 940 ntBASIC15.56■□□□□ 0.08
Depdc1bQ8BH88 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Depdc1bQ8BH88 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Depdc1bQ8BH88 CT025626.1-201ENSMUST00000223735 1455 ntBASIC15.56■□□□□ 0.08
Depdc1bQ8BH88 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Depdc1bQ8BH88 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Depdc1bQ8BH88 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC15.56■□□□□ 0.08
Depdc1bQ8BH88 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
Depdc1bQ8BH88 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
Depdc1bQ8BH88 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Depdc1bQ8BH88 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Depdc1bQ8BH88 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Depdc1bQ8BH88 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC15.55■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms