Protein–RNA interactions for Protein: Q8BGY9

Slc5a7, High affinity choline transporter 1, mousemouse

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc5a7Q8BGY9 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Slc5a7Q8BGY9 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC12.53□□□□□ -0.4
Slc5a7Q8BGY9 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Slc5a7Q8BGY9 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Slc5a7Q8BGY9 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC12.53□□□□□ -0.4
Slc5a7Q8BGY9 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Slc5a7Q8BGY9 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Slc5a7Q8BGY9 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
Slc5a7Q8BGY9 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Slc5a7Q8BGY9 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Slc5a7Q8BGY9 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Slc5a7Q8BGY9 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Slc5a7Q8BGY9 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Slc5a7Q8BGY9 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Slc5a7Q8BGY9 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Slc5a7Q8BGY9 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Slc5a7Q8BGY9 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Slc5a7Q8BGY9 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Slc5a7Q8BGY9 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Slc5a7Q8BGY9 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC12.53□□□□□ -0.4
Slc5a7Q8BGY9 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Slc5a7Q8BGY9 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Slc5a7Q8BGY9 Olfr286-202ENSMUST00000205305 969 ntBASIC12.53□□□□□ -0.4
Slc5a7Q8BGY9 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Slc5a7Q8BGY9 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Slc5a7Q8BGY9 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Slc5a7Q8BGY9 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Slc5a7Q8BGY9 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Slc5a7Q8BGY9 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC12.53□□□□□ -0.4
Slc5a7Q8BGY9 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Slc5a7Q8BGY9 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Slc5a7Q8BGY9 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Slc5a7Q8BGY9 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Slc5a7Q8BGY9 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Slc5a7Q8BGY9 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Slc5a7Q8BGY9 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Slc5a7Q8BGY9 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Slc5a7Q8BGY9 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC12.52□□□□□ -0.4
Slc5a7Q8BGY9 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC12.52□□□□□ -0.4
Slc5a7Q8BGY9 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC12.52□□□□□ -0.4
Slc5a7Q8BGY9 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Slc5a7Q8BGY9 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.4
Slc5a7Q8BGY9 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Slc5a7Q8BGY9 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Slc5a7Q8BGY9 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Slc5a7Q8BGY9 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Slc5a7Q8BGY9 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Slc5a7Q8BGY9 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Slc5a7Q8BGY9 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Slc5a7Q8BGY9 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC12.52□□□□□ -0.41
Slc5a7Q8BGY9 AC159106.1-201ENSMUST00000224421 690 ntBASIC12.52□□□□□ -0.41
Slc5a7Q8BGY9 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Slc5a7Q8BGY9 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Slc5a7Q8BGY9 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Slc5a7Q8BGY9 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
Slc5a7Q8BGY9 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
Slc5a7Q8BGY9 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
Slc5a7Q8BGY9 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Slc5a7Q8BGY9 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Slc5a7Q8BGY9 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Slc5a7Q8BGY9 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Slc5a7Q8BGY9 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Slc5a7Q8BGY9 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Slc5a7Q8BGY9 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Slc5a7Q8BGY9 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC12.52□□□□□ -0.41
Slc5a7Q8BGY9 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Slc5a7Q8BGY9 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Slc5a7Q8BGY9 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Slc5a7Q8BGY9 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Slc5a7Q8BGY9 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Slc5a7Q8BGY9 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Slc5a7Q8BGY9 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Slc5a7Q8BGY9 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
Slc5a7Q8BGY9 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Slc5a7Q8BGY9 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Slc5a7Q8BGY9 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Slc5a7Q8BGY9 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Slc5a7Q8BGY9 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Slc5a7Q8BGY9 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Slc5a7Q8BGY9 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Slc5a7Q8BGY9 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Slc5a7Q8BGY9 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Slc5a7Q8BGY9 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Slc5a7Q8BGY9 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC12.51□□□□□ -0.41
Slc5a7Q8BGY9 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Slc5a7Q8BGY9 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Slc5a7Q8BGY9 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Slc5a7Q8BGY9 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Slc5a7Q8BGY9 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Slc5a7Q8BGY9 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC12.51□□□□□ -0.41
Slc5a7Q8BGY9 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Slc5a7Q8BGY9 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Slc5a7Q8BGY9 Gm15372-201ENSMUST00000120729 834 ntBASIC12.51□□□□□ -0.41
Slc5a7Q8BGY9 Gm13836-201ENSMUST00000121159 501 ntBASIC12.51□□□□□ -0.41
Slc5a7Q8BGY9 Gm4691-201ENSMUST00000182339 1000 ntBASIC12.51□□□□□ -0.41
Slc5a7Q8BGY9 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC12.51□□□□□ -0.41
Slc5a7Q8BGY9 Gm2451-201ENSMUST00000199447 999 ntBASIC12.51□□□□□ -0.41
Slc5a7Q8BGY9 Gm10290-201ENSMUST00000200451 999 ntBASIC12.51□□□□□ -0.41
Slc5a7Q8BGY9 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Slc5a7Q8BGY9 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms