Protein–RNA interactions for Protein: Q811S7

Ubp1, Upstream-binding protein 1, mousemouse

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubp1Q811S7 Gm4081-201ENSMUST00000195287 1838 ntBASIC14.13□□□□□ -0.15
Ubp1Q811S7 Fgf17-202ENSMUST00000227123 1336 ntBASIC14.13□□□□□ -0.15
Ubp1Q811S7 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ubp1Q811S7 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ubp1Q811S7 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ubp1Q811S7 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC14.13□□□□□ -0.15
Ubp1Q811S7 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Ubp1Q811S7 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ubp1Q811S7 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Ubp1Q811S7 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Ubp1Q811S7 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC14.12□□□□□ -0.15
Ubp1Q811S7 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ubp1Q811S7 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ubp1Q811S7 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ubp1Q811S7 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ubp1Q811S7 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Ubp1Q811S7 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ubp1Q811S7 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC14.12□□□□□ -0.15
Ubp1Q811S7 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Ubp1Q811S7 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Ubp1Q811S7 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ubp1Q811S7 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Ubp1Q811S7 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Ubp1Q811S7 AC139382.1-201ENSMUST00000221402 498 ntBASIC14.12□□□□□ -0.15
Ubp1Q811S7 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ubp1Q811S7 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ubp1Q811S7 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ubp1Q811S7 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ubp1Q811S7 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC14.12□□□□□ -0.15
Ubp1Q811S7 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Ubp1Q811S7 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ubp1Q811S7 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC14.12□□□□□ -0.15
Ubp1Q811S7 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ubp1Q811S7 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ubp1Q811S7 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ubp1Q811S7 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ubp1Q811S7 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ubp1Q811S7 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ubp1Q811S7 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ubp1Q811S7 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ubp1Q811S7 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Ubp1Q811S7 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC14.12□□□□□ -0.15
Ubp1Q811S7 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ubp1Q811S7 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Ubp1Q811S7 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Ubp1Q811S7 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Ubp1Q811S7 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC14.11□□□□□ -0.15
Ubp1Q811S7 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC14.11□□□□□ -0.15
Ubp1Q811S7 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Ubp1Q811S7 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ubp1Q811S7 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Ubp1Q811S7 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ubp1Q811S7 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ubp1Q811S7 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ubp1Q811S7 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ubp1Q811S7 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Ubp1Q811S7 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC14.11□□□□□ -0.15
Ubp1Q811S7 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ubp1Q811S7 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ubp1Q811S7 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ubp1Q811S7 Gm45779-201ENSMUST00000212189 4064 ntBASIC14.11□□□□□ -0.15
Ubp1Q811S7 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ubp1Q811S7 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ubp1Q811S7 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ubp1Q811S7 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ubp1Q811S7 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC14.11□□□□□ -0.15
Ubp1Q811S7 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Ubp1Q811S7 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ubp1Q811S7 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC14.11□□□□□ -0.15
Ubp1Q811S7 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Ubp1Q811S7 Gm29541-201ENSMUST00000191351 678 ntBASIC14.11□□□□□ -0.15
Ubp1Q811S7 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ubp1Q811S7 Gm2594-201ENSMUST00000214774 742 ntBASIC14.11□□□□□ -0.15
Ubp1Q811S7 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ubp1Q811S7 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ubp1Q811S7 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ubp1Q811S7 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ubp1Q811S7 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC14.11□□□□□ -0.15
Ubp1Q811S7 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ubp1Q811S7 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ubp1Q811S7 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ubp1Q811S7 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Ubp1Q811S7 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ubp1Q811S7 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC14.1□□□□□ -0.15
Ubp1Q811S7 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC14.1□□□□□ -0.15
Ubp1Q811S7 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ubp1Q811S7 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC14.1□□□□□ -0.15
Ubp1Q811S7 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Ubp1Q811S7 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ubp1Q811S7 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ubp1Q811S7 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ubp1Q811S7 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Ubp1Q811S7 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Ubp1Q811S7 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ubp1Q811S7 Gm26823-201ENSMUST00000181425 2361 ntTSL 5 BASIC14.1□□□□□ -0.15
Ubp1Q811S7 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ubp1Q811S7 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ubp1Q811S7 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Ubp1Q811S7 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ubp1Q811S7 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 48.5 ms